RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 NPY6RQ99463 290 aa16.82■□□□□ 0.28
LSM12-202ENST00000585388 C2orf49Q9BVC5 232 aaPredicted RBP16.82■□□□□ 0.28
LSM12-202ENST00000585388 SIK2Q9H0K1 926 aa16.82■□□□□ 0.28
LSM12-202ENST00000585388 MUC3BQ9H195 1237 aa16.82■□□□□ 0.28
LSM12-202ENST00000585388 PDCL3Q9H2J4 239 aa16.82■□□□□ 0.28
LSM12-202ENST00000585388 AJAP1Q9UKB5 411 aaPredicted RBP16.82■□□□□ 0.28
LSM12-202ENST00000585388 HS3ST2Q9Y278 367 aa16.82■□□□□ 0.28
LSM12-202ENST00000585388 FARP1Q9Y4F1 1045 aaPredicted RBP16.82■□□□□ 0.28
LSM12-202ENST00000585388 OR51B4Q9Y5P0 310 aa16.82■□□□□ 0.28
LSM12-202ENST00000585388 NBEAQ8NFP9 2946 aa16.82■□□□□ 0.28
LSM12-202ENST00000585388 WNT9AO14904 365 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 RFPL3O75679 317 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 RHOCP08134 193 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 C1SP09871 688 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 PRKCSHP14314 528 aaPredicted RBP16.81■□□□□ 0.28
LSM12-202ENST00000585388 SCNN1AP37088 669 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 GGCXP38435 758 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 SULT1E1P49888 294 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 IRAK1P51617 712 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 METAP1P53582 386 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 SHBQ15464 509 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 SETMARQ53H47 684 aaPredicted RBP16.81■□□□□ 0.28
LSM12-202ENST00000585388 PRAMEF14Q5SWL7 426 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 AGBL4Q5VU57 503 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 OTUD1Q5VV17 481 aaPredicted RBP16.81■□□□□ 0.28
LSM12-202ENST00000585388 TMPRSS12Q86WS5 348 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 FAM71AQ8IYT1 594 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 TMEM35BQ8NCS4 154 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 TKTL2Q9H0I9 626 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 WDCPQ9H6R7 721 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 PREBQ9HCU5 417 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 PIGVQ9NUD9 493 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.81■□□□□ 0.28
LSM12-202ENST00000585388 SARDHQ9UL12 918 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 PPM1HQ9ULR3 514 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 RAXQ9Y2V3 346 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 ACACAQ13085 2346 aa16.81■□□□□ 0.28
LSM12-202ENST00000585388 TRABD2BA6NFA1 517 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 FOXN3O00409 490 aaPredicted RBP16.8■□□□□ 0.28
LSM12-202ENST00000585388 PLK4O00444 970 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 BNIP3LO60238 219 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 F9P00740 461 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 PNMA6AP0CW24 399 aaPredicted RBP16.8■□□□□ 0.28
LSM12-202ENST00000585388 MAT2AP31153 395 aaKnown RBP16.8■□□□□ 0.28
LSM12-202ENST00000585388 CLCN1P35523 988 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 RXRGP48443 463 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 CXCR3P49682 368 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 CCDC15Q0P6D6 951 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 CNTN1Q12860 1018 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 CAMK2BQ13554 666 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 STAT4Q14765 748 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 LRRC31Q6UY01 552 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 EID2Q8N6I1 236 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 DCAF4L2Q8NA75 395 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 MSANTD4Q8NCY6 345 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 PGAP3Q96FM1 320 aaPredicted RBP16.8■□□□□ 0.28
LSM12-202ENST00000585388 NDST4Q9H3R1 872 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 SCUBE2Q9NQ36 999 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 PLCB1Q9NQ66 1216 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 ARHGEF38Q9NXL2 777 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 ARHGAP20Q9P2F6 1191 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 DACH1Q9UI36 760 aa16.8■□□□□ 0.28
LSM12-202ENST00000585388 LAMA5O15230 3695 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 APC2O95996 2303 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 FAM149AA5PLN7 773 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 PRAMEF26H0Y7S4 382 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 ADCY5O95622 1261 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 SRCP12931 536 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 CDH5P33151 784 aaPredicted RBP16.79■□□□□ 0.28
LSM12-202ENST00000585388 ACADVLP49748 655 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 CLCN6P51797 869 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 RNASE9P60153 205 aaKnown RBP16.79■□□□□ 0.28
LSM12-202ENST00000585388 DEUP1Q05D60 604 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 RAPGEF1Q13905 1077 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 POM121L1PQ3SYA9 428 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 FAM102AQ5T9C2 384 aaPredicted RBP16.79■□□□□ 0.28
LSM12-202ENST00000585388 SFMBT2Q5VUG0 894 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 C19orf48Q6RUI8 117 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 C14orf80Q86SX3 495 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 SETD3Q86TU7 594 aaPredicted RBP16.79■□□□□ 0.28
LSM12-202ENST00000585388 ATP11CQ8NB49 1132 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 NT5C3BQ969T7 300 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 NXPE2Q96DL1 559 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 TUBGCP2Q9BSJ2 902 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 DYRK4Q9NR20 520 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 VPS51Q9UID3 782 aa16.79■□□□□ 0.28
LSM12-202ENST00000585388 GOLGA4Q13439 2230 aaKnown RBP16.79■□□□□ 0.28
LSM12-202ENST00000585388 RNGTTO60942 597 aaKnown RBP16.78■□□□□ 0.28
LSM12-202ENST00000585388 CNTN5O94779 1100 aa16.78■□□□□ 0.28
LSM12-202ENST00000585388 LSM8O95777 96 aaKnown RBP16.78■□□□□ 0.28
LSM12-202ENST00000585388 PRNPP04156 253 aa16.78■□□□□ 0.28
LSM12-202ENST00000585388 GABRB2P47870 512 aa16.78■□□□□ 0.28
LSM12-202ENST00000585388 CYP4F3Q08477 520 aa16.78■□□□□ 0.28
LSM12-202ENST00000585388 DNAJC3Q13217 504 aa16.78■□□□□ 0.28
LSM12-202ENST00000585388 DRAP1Q14919 205 aaPredicted RBP16.78■□□□□ 0.28
LSM12-202ENST00000585388 COL28A1Q2UY09 1125 aa16.78■□□□□ 0.28
LSM12-202ENST00000585388 SLC25A52Q3SY17 297 aa16.78■□□□□ 0.28
LSM12-202ENST00000585388 VWA3BQ502W6 1294 aa16.78■□□□□ 0.28
LSM12-202ENST00000585388 ALFQ53S48 1182 aa16.78■□□□□ 0.28
LSM12-202ENST00000585388 C6orf118Q5T5N4 469 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms