RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 VCLP18206 1134 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 WARSP23381 471 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 ABCG1P45844 678 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 CSRP3P50461 194 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 LILRA4P59901 499 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 SCAPQ12770 1279 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 CERCAMQ5T4B2 595 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 MAP3K21Q5TCX8 1036 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 CLEC20AQ6ZU45 233 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 SIX6OS1Q8N1H7 587 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 VPS39Q96JC1 886 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 MLPHQ9BV36 600 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 GBA3Q9H227 469 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 WDR6Q9NNW5 1121 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 ANLNQ9NQW6 1124 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 ATP9BO43861 1147 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 DDNO94850 711 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 SMPD1P17405 629 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 HCAR3P49019 387 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 RPL26P61254 145 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 CCNA1P78396 465 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 GRM2Q14416 872 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 TRIP10Q15642 601 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 DGKDQ16760 1214 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 LIN52Q52LA3 116 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 TOP6BLQ8N6T0 577 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 NPWQ8N729 165 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 ACVR1CQ8NER5 493 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 BRD8Q9H0E9 1235 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 CHRAC1Q9NRG0 131 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 C20orf96Q9NUD7 363 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 CPSF2Q9P2I0 782 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 STK39Q9UEW8 545 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 MID2Q9UJV3 735 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 NRCAMQ92823 1304 aa14.47□□□□□ -0.09
CDK5RAP3-237ENST00000585163 SCN4AP35499 1836 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 UNCXA6NJT0 531 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 MTSS1O43312 755 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 APOA4P06727 396 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 CHRNGP07510 517 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 THRAP10827 490 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 CYP2C9P11712 490 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 PTPN1P18031 435 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 NPY2RP49146 381 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 TKTL1P51854 596 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 TPI1P60174 286 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 DLG1Q12959 904 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 DUSP28Q4G0W2 176 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 ST13P4Q8IZP2 240 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 TMEM151AQ8N4L1 468 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 GPRC5AQ8NFJ5 357 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 RDH11Q8TC12 318 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 AGR3Q8TD06 166 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 HDAC11Q96DB2 347 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 TSPAN18Q96SJ8 248 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 TRIM4Q9C037 500 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 IL22Q9GZX6 179 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 DRC3Q9H069 523 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 RNF39Q9H2S5 420 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 TRHDEQ9UKU6 1024 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 PRPF19Q9UMS4 504 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 RAP2CQ9Y3L5 183 aa14.46□□□□□ -0.09
CDK5RAP3-237ENST00000585163 RGSL1A5PLK6 1076 aa14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 NRP1O14786 923 aa14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 HDAC3O15379 428 aa14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 AMHP03971 560 aa14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 AXLP30530 894 aa14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SERPINB5P36952 375 aa14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 HADHAP40939 763 aa14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ZBTB17Q13105 803 aa14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ITGA7Q13683 1181 aa14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TTLL12Q14166 644 aaPredicted RBP14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 INTS6LQ5JSJ4 861 aaKnown RBP14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ZNF467Q7Z7K2 595 aaPredicted RBP14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 BTBD9Q96Q07 612 aa14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CENPKQ9BS16 269 aa14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SPATA16Q9BXB7 569 aa14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ACE2Q9BYF1 805 aaPredicted RBP14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 IARS2Q9NSE4 1012 aaKnown RBP14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PCNTO95613 3336 aa14.46□□□□□ -0.1
CDK5RAP3-237ENST00000585163 DICER1Q9UPY3 1922 aaKnown RBP14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SNUPNO95149 360 aaKnown RBP14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CD1EP15812 388 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 MPSTP25325 297 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PIK3R1P27986 724 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GSTT1P30711 240 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 RPL14P50914 215 aaKnown RBP14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 HK2P52789 917 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 RBBP5Q15291 538 aaKnown RBP14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 MMEL1Q495T6 779 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 OGFRL1Q5TC84 451 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 RASIP1Q5U651 963 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 LIPMQ5VYY2 423 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ITPRIPL1Q6GPH6 555 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ZYG11AQ6WRX3 759 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ADAM32Q8TC27 787 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GPR22Q99680 433 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 C1QTNF1Q9BXJ1 281 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 WDR55Q9H6Y2 383 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 FBXW11Q9UKB1 542 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms