RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 SRPRAP08240 638 aaKnown RBP14.19□□□□□ -0.14
TRAF4-215ENST00000584944 HOXB2P14652 356 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 ZFXP17010 805 aaPredicted RBP14.19□□□□□ -0.14
TRAF4-215ENST00000584944 AMPD1P23109 780 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 KDELR1P24390 212 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 HOXC13P31276 330 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 WASP42768 502 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 RECQLP46063 649 aaPredicted RBP14.19□□□□□ -0.14
TRAF4-215ENST00000584944 NDST2P52849 883 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 MESP2Q0VG99 397 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 MTAPQ13126 283 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 TFDP2Q14188 446 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 DPYSL3Q14195 570 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 ATP13A4Q4VNC1 1196 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 ANKRD20A8PQ5CZ79 823 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 EMC10Q5UCC4 262 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 EGFLAMQ63HQ2 1017 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 RNF43Q68DV7 783 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 MAMSTRQ6ZN01 415 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 CYP4V2Q6ZWL3 525 aaPredicted RBP14.19□□□□□ -0.14
TRAF4-215ENST00000584944 ADIPOR2Q86V24 386 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 CPNE8Q86YQ8 564 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 SFTPA1Q8IWL2 248 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 KATNAL2Q8IYT4 538 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 APCDD1Q8J025 514 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 PGBD3Q8N328 593 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 DCAF4L2Q8NA75 395 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 ATP11CQ8NB49 1132 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 TSTD1Q8NFU3 115 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 ATRIPQ8WXE1 791 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 SORCS1Q8WY21 1168 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 CCDC114Q96M63 670 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 KCNF1Q9H3M0 494 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 PRDM16Q9HAZ2 1276 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 CACNA2D2Q9NY47 1150 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 ERVW-1Q9UQF0 538 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 STARD13Q9Y3M8 1113 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 FARP1Q9Y4F1 1045 aaPredicted RBP14.19□□□□□ -0.14
TRAF4-215ENST00000584944 A0A0D9SEW6 157 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 ZSCAN5CA6NGD5 496 aaPredicted RBP14.18□□□□□ -0.14
TRAF4-215ENST00000584944 RASA4BC9J798 803 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 APOL1O14791 398 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 RASA4O43374 803 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 RNASEH1O60930 286 aaKnown RBP14.18□□□□□ -0.14
TRAF4-215ENST00000584944 CTNNA2P26232 953 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 CTNNA1P35221 906 aaKnown RBP14.18□□□□□ -0.14
TRAF4-215ENST00000584944 DGKEP52429 567 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 PLK1P53350 603 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 MMRN1Q13201 1228 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 DPYSQ14117 519 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 ZNF234Q14588 700 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 PUM1Q14671 1186 aaKnown RBP eCLIP14.18□□□□□ -0.14
TRAF4-215ENST00000584944 KAZNQ674X7 775 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 TSSK4Q6SA08 328 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 ZNF662Q6ZS27 426 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 NLRP14Q86W24 1093 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 UMODL1-AS1Q8N2C9 162 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 ATPAF2Q8N5M1 289 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 IL17RCQ8NAC3 791 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 OR7D4Q8NG98 312 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 EXD1Q8NHP7 514 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 RAPGEF5Q92565 580 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 TTC17Q96AE7 1141 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 P2RY11Q96G91 374 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 CELF6Q96J87 481 aaKnown RBP14.18□□□□□ -0.14
TRAF4-215ENST00000584944 RPL10LQ96L21 214 aaKnown RBP14.18□□□□□ -0.14
TRAF4-215ENST00000584944 SP110Q9HB58 689 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 ZDHHC4Q9NPG8 344 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 HAUS2Q9NVX0 235 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 DLL3Q9NYJ7 618 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 SUN2Q9UH99 717 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 MMP17Q9ULZ9 603 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 STON1Q9Y6Q2 735 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 MYOFQ9NZM1 2061 aa14.18□□□□□ -0.14
TRAF4-215ENST00000584944 A0A0U1RQJ8 604 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 WASH4PA8MWX3 477 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 CHURC1-FNTBB4DL54 471 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 BNIP3LO60238 219 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 CD48P09326 243 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 TDGF1P13385 188 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 HNRNPLP14866 589 aaKnown RBP eCLIP14.17□□□□□ -0.14
TRAF4-215ENST00000584944 KIR2DL1P43626 348 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-215ENST00000584944 COPS2P61201 443 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 DYNLT1P63172 113 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 SLC20A2Q08357 652 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 RPS6KA1Q15418 735 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 TFDP3Q5H9I0 405 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 BZW1Q7L1Q6 419 aaKnown RBP14.17□□□□□ -0.14
TRAF4-215ENST00000584944 SYT13Q7L8C5 426 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 DGLUCYQ7Z3D6 616 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 KIAA0907Q7Z7F0 614 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-215ENST00000584944 METTL3Q86U44 580 aaKnown RBP14.17□□□□□ -0.14
TRAF4-215ENST00000584944 NT5DC3Q86UY8 548 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 VSIG1Q86XK7 387 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 BBS5Q8N3I7 341 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 LRRC57Q8N9N7 239 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 ARHGEF2Q92974 986 aaKnown RBP14.17□□□□□ -0.14
TRAF4-215ENST00000584944 FAM126AQ9BYI3 521 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-215ENST00000584944 EPC1Q9H2F5 836 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 THAP10Q9P2Z0 257 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms