RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 PARD6AQ9NPB6 346 aa16.65■□□□□ 0.26
ERBB2-222ENST00000584908 USP18Q9UMW8 372 aa16.65■□□□□ 0.26
ERBB2-222ENST00000584908 NUMA1Q14980 2115 aa16.65■□□□□ 0.26
ERBB2-222ENST00000584908 FGF10O15520 208 aaPredicted RBP16.64■□□□□ 0.25
ERBB2-222ENST00000584908 MAP3K13O43283 966 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 AKR1B10O60218 316 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 PRPSAP2O60256 369 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 SNAP91O60641 907 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 H2AFZP0C0S5 128 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 TMEM253P0C7T8 217 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 ACADMP11310 421 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 SRCP12931 536 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 EPHB2P29323 1055 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 CD6P30203 668 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 CLCN6P51797 869 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 ZNF135P52742 658 aaPredicted RBP16.64■□□□□ 0.25
ERBB2-222ENST00000584908 SLC20A2Q08357 652 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 ELAVL3Q14576 367 aaKnown RBP16.64■□□□□ 0.25
ERBB2-222ENST00000584908 CSRP2Q16527 193 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 H2AFVQ71UI9 128 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 CCDC42Q96M95 316 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 ANP32EQ9BTT0 268 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 PACSIN1Q9BY11 444 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 ARRDC1-AS1Q9H2J1 176 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 SEMA4GQ9NTN9 838 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 UVRAGQ9P2Y5 699 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 PCSK1NQ9UHG2 260 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 IP6K2Q9UHH9 426 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 ANAPC7Q9UJX3 599 aa16.64■□□□□ 0.25
ERBB2-222ENST00000584908 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 ALOX15BO15296 676 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 CREB3O43889 395 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 FOXD2O60548 495 aaPredicted RBP16.63■□□□□ 0.25
ERBB2-222ENST00000584908 RNASEH1O60930 286 aaKnown RBP16.63■□□□□ 0.25
ERBB2-222ENST00000584908 MT-CO1P00395 513 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 ZNF806P0C7X5 589 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 MPLP40238 635 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 HCAR3P49019 387 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 NUMBP49757 651 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 YBEYP58557 167 aaPredicted RBP16.63■□□□□ 0.25
ERBB2-222ENST00000584908 RPL6Q02878 288 aaKnown RBP16.63■□□□□ 0.25
ERBB2-222ENST00000584908 SPEM2Q0P670 501 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 DLG2Q15700 870 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 CA9Q16790 459 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 BOLA3Q53S33 107 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 PEAR1Q5VY43 1037 aaPredicted RBP16.63■□□□□ 0.25
ERBB2-222ENST00000584908 RETSATQ6NUM9 610 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 USP30Q70CQ3 517 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 TMEFF1Q8IYR6 380 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 UMODL1-AS1Q8N2C9 162 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 ZNF564Q8TBZ8 553 aaPredicted RBP16.63■□□□□ 0.25
ERBB2-222ENST00000584908 CTNNBL1Q8WYA6 563 aaPredicted RBP16.63■□□□□ 0.25
ERBB2-222ENST00000584908 ARHGEF2Q92974 986 aaKnown RBP16.63■□□□□ 0.25
ERBB2-222ENST00000584908 ZNF419Q96HQ0 510 aaPredicted RBP16.63■□□□□ 0.25
ERBB2-222ENST00000584908 PCED1AQ9H1Q7 454 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 NOL6Q9H6R4 1146 aaKnown RBP16.63■□□□□ 0.25
ERBB2-222ENST00000584908 CATSPERBQ9H7T0 1116 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 ATP13A1Q9HD20 1204 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 GPATCH2LQ9NWQ4 482 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 DONSONQ9NYP3 566 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 DNAI1Q9UI46 699 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 LCMT1Q9UIC8 334 aa16.63■□□□□ 0.25
ERBB2-222ENST00000584908 MYO1FO00160 1098 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 MCF2LO15068 1137 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 RAMP2O60895 175 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 CD160O95971 181 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 DNTTP04053 509 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 VAV1P15498 845 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 FECHP22830 423 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 GLDCP23378 1020 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 IL1R2P27930 398 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 HOXD12P35452 270 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 ACVRL1P37023 503 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 DPP6P42658 865 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 PTGER3P43115 390 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 TPI1P60174 286 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 ARF5P84085 180 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 CST6Q15828 149 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 DPYSL2Q16555 572 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 TTC31Q49AM3 519 aaPredicted RBP16.62■□□□□ 0.25
ERBB2-222ENST00000584908 SLC41A1Q8IVJ1 513 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 STK40Q8N2I9 435 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 CADM4Q8NFZ8 388 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 TEKT4Q8WW24 435 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 TOE1Q96GM8 510 aaKnown RBP16.62■□□□□ 0.25
ERBB2-222ENST00000584908 KCTD15Q96SI1 283 aaPredicted RBP16.62■□□□□ 0.25
ERBB2-222ENST00000584908 PABPC3Q9H361 631 aaKnown RBP16.62■□□□□ 0.25
ERBB2-222ENST00000584908 DHX35Q9H5Z1 703 aaKnown RBP16.62■□□□□ 0.25
ERBB2-222ENST00000584908 INTUQ9ULD6 942 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 CACNA1EQ15878 2313 aa16.62■□□□□ 0.25
ERBB2-222ENST00000584908 CBX4O00257 560 aa16.61■□□□□ 0.25
ERBB2-222ENST00000584908 SMAD6O43541 496 aaKnown RBP16.61■□□□□ 0.25
ERBB2-222ENST00000584908 ZNF821O75541 412 aaPredicted RBP16.61■□□□□ 0.25
ERBB2-222ENST00000584908 LCA5LO95447 670 aa16.61■□□□□ 0.25
ERBB2-222ENST00000584908 ADH1BP00325 375 aa16.61■□□□□ 0.25
ERBB2-222ENST00000584908 TCF4P15884 667 aa16.61■□□□□ 0.25
ERBB2-222ENST00000584908 DHPSP49366 369 aaPredicted RBP16.61■□□□□ 0.25
ERBB2-222ENST00000584908 SERPINH1P50454 418 aaKnown RBP16.61■□□□□ 0.25
ERBB2-222ENST00000584908 SLC25A11Q02978 314 aaKnown RBP16.61■□□□□ 0.25
ERBB2-222ENST00000584908 ZNF33AQ06730 810 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms