RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 FIGNQ5HY92 759 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 E4F1Q66K89 784 aaPredicted RBP20.94■□□□□ 0.94
SS18-224ENST00000584083 ZNF571Q7Z3V5 609 aaPredicted RBP20.94■□□□□ 0.94
SS18-224ENST00000584083 DSG4Q86SJ6 1040 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 HDDC3Q8N4P3 179 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 ZCCHC9Q8N567 271 aaKnown RBP20.94■□□□□ 0.94
SS18-224ENST00000584083 SH2D3CQ8N5H7 860 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 CCDC185Q8N715 623 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 ATP11CQ8NB49 1132 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 OR7D4Q8NG98 312 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 OR8D1Q8WZ84 308 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 VPS51Q9UID3 782 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 ASCC3Q8N3C0 2202 aaKnown RBP20.93■□□□□ 0.94
SS18-224ENST00000584083 A0A1B0GTW7 788 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 ILVBLA1L0T0 632 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 FSBPO95073 299 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 ADH1BP00325 375 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 PLEKP08567 350 aaPredicted RBP20.93■□□□□ 0.94
SS18-224ENST00000584083 SKILP12757 684 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 C5AR1P21730 350 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 NRG1Q02297 640 aaPredicted RBP20.93■□□□□ 0.94
SS18-224ENST00000584083 PPP1R15BQ5SWA1 713 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 ARTNQ5T4W7 220 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 ZNF783Q6ZMS7 281 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 Q6ZVU0 165 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 SLFN11Q7Z7L1 901 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 DCAF4L2Q8NA75 395 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 CNPY3Q9BT09 278 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 MAGEB5Q9BZ81 275 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 NEUROG2Q9H2A3 272 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 PARVAQ9NVD7 372 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 IFNKQ9P0W0 207 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 SERGEFQ9UGK8 458 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 HS3ST2Q9Y278 367 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 PCDH15Q96QU1 1955 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 CACNA1EQ15878 2313 aa20.93■□□□□ 0.94
SS18-224ENST00000584083 FAM72CH0Y354 149 aa20.92■□□□□ 0.94
SS18-224ENST00000584083 CBX4O00257 560 aa20.92■□□□□ 0.94
SS18-224ENST00000584083 ARHGAP33O14559 1287 aa20.92■□□□□ 0.94
SS18-224ENST00000584083 BCAT2O15382 392 aaPredicted RBP20.92■□□□□ 0.94
SS18-224ENST00000584083 MT-CO1P00395 513 aa20.92■□□□□ 0.94
SS18-224ENST00000584083 FTLP02792 175 aaPredicted RBP20.92■□□□□ 0.94
SS18-224ENST00000584083 SRCP12931 536 aa20.92■□□□□ 0.94
SS18-224ENST00000584083 FAM72AQ5TYM5 149 aa20.92■□□□□ 0.94
SS18-224ENST00000584083 FAM72DQ6L9T8 149 aa20.92■□□□□ 0.94
SS18-224ENST00000584083 LINGO4Q6UY18 593 aa20.92■□□□□ 0.94
SS18-224ENST00000584083 FAM72BQ86X60 149 aa20.92■□□□□ 0.94
SS18-224ENST00000584083 CPLX3Q8WVH0 158 aa20.92■□□□□ 0.94
SS18-224ENST00000584083 NTAN1Q96AB6 310 aa20.92■□□□□ 0.94
SS18-224ENST00000584083 TBC1D31Q96DN5 1066 aa20.92■□□□□ 0.94
SS18-224ENST00000584083 ATP13A1Q9HD20 1204 aa20.92■□□□□ 0.94
SS18-224ENST00000584083 ZNF212Q9UDV6 495 aa20.92■□□□□ 0.94
SS18-224ENST00000584083 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.92■□□□□ 0.94
SS18-224ENST00000584083 FARP1Q9Y4F1 1045 aaPredicted RBP20.92■□□□□ 0.94
SS18-224ENST00000584083 K7ERQ8 282 aa20.91■□□□□ 0.94
SS18-224ENST00000584083 DDX3XO00571 662 aaKnown RBP eCLIP20.91■□□□□ 0.94
SS18-224ENST00000584083 ATMINO43313 823 aaPredicted RBP20.91■□□□□ 0.94
SS18-224ENST00000584083 LRIG2O94898 1065 aa20.91■□□□□ 0.94
SS18-224ENST00000584083 GZMAP12544 262 aa20.91■□□□□ 0.94
SS18-224ENST00000584083 RHOQP17081 205 aa20.91■□□□□ 0.94
SS18-224ENST00000584083 GOT1P17174 413 aa20.91■□□□□ 0.94
SS18-224ENST00000584083 GLDCP23378 1020 aa20.91■□□□□ 0.94
SS18-224ENST00000584083 PBX1P40424 430 aa20.91■□□□□ 0.94
SS18-224ENST00000584083 GALCP54803 685 aa20.91■□□□□ 0.94
SS18-224ENST00000584083 GNA12Q03113 381 aa20.91■□□□□ 0.94
SS18-224ENST00000584083 MAMLD1Q13495 774 aa20.91■□□□□ 0.94
SS18-224ENST00000584083 EFHC2Q5JST6 749 aa20.91■□□□□ 0.94
SS18-224ENST00000584083 MANEALQ5VSG8 457 aa20.91■□□□□ 0.94
SS18-224ENST00000584083 DNAAF5Q86Y56 855 aa20.91■□□□□ 0.94
SS18-224ENST00000584083 MINDY1Q8N5J2 469 aa20.91■□□□□ 0.94
SS18-224ENST00000584083 AADATQ8N5Z0 425 aa20.91■□□□□ 0.94
SS18-224ENST00000584083 BIRC7Q96CA5 298 aa20.91■□□□□ 0.94
SS18-224ENST00000584083 FZD4Q9ULV1 537 aa20.91■□□□□ 0.94
SS18-224ENST00000584083 A0A1W2PQJ5 194 aa20.9■□□□□ 0.94
SS18-224ENST00000584083 LRRC72A6NJI9 287 aa20.9■□□□□ 0.94
SS18-224ENST00000584083 MCF2LO15068 1137 aa20.9■□□□□ 0.94
SS18-224ENST00000584083 RTN2O75298 545 aa20.9■□□□□ 0.94
SS18-224ENST00000584083 SCAPQ12770 1279 aa20.9■□□□□ 0.94
SS18-224ENST00000584083 TDRD12Q587J7 1177 aaKnown RBP20.9■□□□□ 0.94
SS18-224ENST00000584083 FAM46CQ5VWP2 391 aa20.9■□□□□ 0.94
SS18-224ENST00000584083 KIAA0895LQ68EN5 471 aa20.9■□□□□ 0.94
SS18-224ENST00000584083 RETSATQ6NUM9 610 aa20.9■□□□□ 0.94
SS18-224ENST00000584083 NCEH1Q6PIU2 408 aa20.9■□□□□ 0.94
SS18-224ENST00000584083 TMC6Q7Z403 805 aa20.9■□□□□ 0.94
SS18-224ENST00000584083 OR2I1PQ8NGU4 316 aa20.9■□□□□ 0.94
SS18-224ENST00000584083 OR14C36Q8NHC7 312 aa20.9■□□□□ 0.94
SS18-224ENST00000584083 CCDC114Q96M63 670 aa20.9■□□□□ 0.94
SS18-224ENST00000584083 RETREG1Q9H6L5 497 aa20.9■□□□□ 0.94
SS18-224ENST00000584083 ADAMTS1Q9UHI8 967 aa20.9■□□□□ 0.94
SS18-224ENST00000584083 DNAI1Q9UI46 699 aa20.9■□□□□ 0.94
SS18-224ENST00000584083 DNAH14Q0VDD8 3507 aa20.9■□□□□ 0.94
SS18-224ENST00000584083 C1QTNF3-AMACRE9PGA6 284 aa20.89■□□□□ 0.93
SS18-224ENST00000584083 ALOX15BO15296 676 aa20.89■□□□□ 0.93
SS18-224ENST00000584083 SMAD6O43541 496 aaKnown RBP20.89■□□□□ 0.93
SS18-224ENST00000584083 PSMA2P25787 234 aa20.89■□□□□ 0.93
SS18-224ENST00000584083 L1CAMP32004 1257 aa20.89■□□□□ 0.93
SS18-224ENST00000584083 ETFBP38117 255 aa20.89■□□□□ 0.93
SS18-224ENST00000584083 MAPKAPK2P49137 400 aa20.89■□□□□ 0.93
SS18-224ENST00000584083 CLCN6P51797 869 aa20.89■□□□□ 0.93
SS18-224ENST00000584083 OGDHQ02218 1023 aa20.89■□□□□ 0.93
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