RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 ERLEC1Q96DZ1 483 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 PSMB7Q99436 277 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 CNPY3Q9BT09 278 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 MUC3BQ9H195 1237 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 HAUS4Q9H6D7 363 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 DNAAF2Q9NVR5 837 aaKnown RBP10.15□□□□□ -0.78
SKA2-208ENST00000583927 VPS28Q9UK41 221 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 NEU3Q9UQ49 428 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.15□□□□□ -0.78
SKA2-208ENST00000583927 BZW2Q9Y6E2 419 aaKnown RBP10.15□□□□□ -0.78
SKA2-208ENST00000583927 CEP295Q9C0D2 2601 aa10.15□□□□□ -0.79
SKA2-208ENST00000583927 LRRK1Q38SD2 2015 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 MEI4A8MW99 385 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 EIF3CLB5ME19 914 aaKnown RBP10.14□□□□□ -0.79
SKA2-208ENST00000583927 GOLGA6L19H0YKK7 550 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 MID1O15344 667 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 BCAT2O15382 392 aaPredicted RBP10.14□□□□□ -0.79
SKA2-208ENST00000583927 SLC7A4O43246 635 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 RTN2O75298 545 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 GJB3O75712 270 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 ADRB1P08588 477 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 ZNF883P0CG24 379 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 SRCP12931 536 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 CEACAM1P13688 526 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 RHOQP17081 205 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 GOT1P17174 413 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 DESP17661 470 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 RRM1P23921 792 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 L1CAMP32004 1257 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 SLC8A1P32418 973 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 UBASH3AP57075 661 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 RPL7AP62424 266 aaKnown RBP10.14□□□□□ -0.79
SKA2-208ENST00000583927 SLC14A1Q13336 389 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 DLG2Q15700 870 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 ASIC2Q16515 512 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 CDO1Q16878 200 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 PPM1JQ5JR12 505 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 SH3PXD2AQ5TCZ1 1133 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 FAM46CQ5VWP2 391 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 E4F1Q66K89 784 aaPredicted RBP10.14□□□□□ -0.79
SKA2-208ENST00000583927 LRSAM1Q6UWE0 723 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 ZNF571Q7Z3V5 609 aaPredicted RBP10.14□□□□□ -0.79
SKA2-208ENST00000583927 LUZP1Q86V48 1076 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 MMAAQ8IVH4 418 aaKnown RBP10.14□□□□□ -0.79
SKA2-208ENST00000583927 PLPP6Q8IY26 295 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 STK40Q8N2I9 435 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 DEFB119Q8N690 84 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 OR8D1Q8WZ84 308 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 CCDC114Q96M63 670 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 EIF3CQ99613 913 aaKnown RBP10.14□□□□□ -0.79
SKA2-208ENST00000583927 ACE2Q9BYF1 805 aaPredicted RBP10.14□□□□□ -0.79
SKA2-208ENST00000583927 CEP44Q9C0F1 390 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 ISCUQ9H1K1 167 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 MAGEH1Q9H213 219 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 MTG2Q9H4K7 406 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 C6orf106Q9H6K1 298 aaPredicted RBP10.14□□□□□ -0.79
SKA2-208ENST00000583927 TMPRSS4Q9NRS4 437 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 SEPT11Q9NVA2 429 aaKnown RBP10.14□□□□□ -0.79
SKA2-208ENST00000583927 PARVAQ9NVD7 372 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 TMEM248Q9NWD8 314 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 FBXL12Q9NXK8 326 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 MPP6Q9NZW5 540 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 VPS51Q9UID3 782 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 PPM1HQ9ULR3 514 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 SHROOM3Q8TF72 1996 aa10.14□□□□□ -0.79
SKA2-208ENST00000583927 ATXN2Q99700 1313 aaKnown RBP10.13□□□□□ -0.79
SKA2-208ENST00000583927 TDRD6O60522 2096 aaKnown RBP10.13□□□□□ -0.79
SKA2-208ENST00000583927 COL5A1P20908 1838 aaPredicted RBP10.13□□□□□ -0.79
SKA2-208ENST00000583927 A0A0D9SEW6 157 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 MED19A0JLT2 244 aaPredicted RBP10.13□□□□□ -0.79
SKA2-208ENST00000583927 LRRC72A6NJI9 287 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 WASH4PA8MWX3 477 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 CCP110O43303 1012 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 SRGAP2O75044 1071 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 ZMPSTE24O75844 475 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 LRIG2O94898 1065 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 GJB6O95452 261 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 CFIP05156 583 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 PLEKP08567 350 aaPredicted RBP10.13□□□□□ -0.79
SKA2-208ENST00000583927 MYBL1P10243 752 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 CD27P26842 260 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 DRD3P35462 400 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 NUDT1P36639 197 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 GRIA4P48058 902 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 CCR5P51681 352 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 AFF3P51826 1226 aaKnown RBP10.13□□□□□ -0.79
SKA2-208ENST00000583927 GALCP54803 685 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 GEMIN4P57678 1058 aaKnown RBP10.13□□□□□ -0.79
SKA2-208ENST00000583927 ZBED6P86452 979 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 GNA12Q03113 381 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 KLHL30Q0D2K2 578 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 SEMA3BQ13214 749 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 MAMLD1Q13495 774 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 ACAP1Q15027 740 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 RAB6CQ53S08 254 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 HGSNATQ68CP4 663 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 RETSATQ6NUM9 610 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 DCUN1D2Q6PH85 259 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 IL27RAQ6UWB1 636 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 TFAP2DQ7Z6R9 452 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms