RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 KRTAP27-1Q3LI81 207 aa4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 ENTPD8Q5MY95 495 aa4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 Q5PR19 223 aa4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 WDR93Q6P2C0 686 aa4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 MORC1Q86VD1 984 aa4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 RASGRP3Q8IV61 690 aa4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 WDR63Q8IWG1 891 aa4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 TXLNBQ8N3L3 684 aa4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 TTC17Q96AE7 1141 aa4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 OSBPL5Q9H0X9 879 aaPredicted RBP4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 PLAC1Q9HBJ0 212 aa4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 KRCC1Q9NPI7 259 aaPredicted RBP4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 WNT16Q9UBV4 365 aa4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 FAM50BQ9Y247 325 aa4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 PTGDR2Q9Y5Y4 395 aa4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 COMMD10Q9Y6G5 202 aa4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 RTEL1-TNFRSF6BF6WH68 1400 aa4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 KANK1Q14678 1352 aa4.52□□□□□ -1.69
SMCHD1-208ENST00000583344 APAF1O14727 1248 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 NEURL1O76050 574 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 ALDOCP09972 364 aaKnown RBP4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 HARSP12081 509 aaKnown RBP4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 KCNJ4P48050 445 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 PCYT1AP49585 367 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 ROR2Q01974 943 aaKnown RBP4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 PMPCAQ10713 525 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 TRAF1Q13077 416 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 UBE4AQ14139 1066 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 MAP9Q49MG5 647 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 PRAMEF19Q5SWL8 479 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 KDELC2Q7Z4H8 507 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 TICAM2Q86XR7 235 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 LMO3Q8TAP4 145 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 DNASE2BQ8WZ79 361 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 IP6K1Q92551 441 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 PHF21BQ96EK2 531 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 FAR2Q96K12 515 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 SLITRK1Q96PX8 696 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 TBCBQ99426 244 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 PAAF1Q9BRP4 392 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 COLEC11Q9BWP8 271 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 DCLK3Q9C098 648 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 NCKIPSDQ9NZQ3 722 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 FBXO4Q9UKT5 387 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 PLCH2O75038 1416 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 MYO5CQ9NQX4 1742 aa4.51□□□□□ -1.69
SMCHD1-208ENST00000583344 SHROOM2Q13796 1616 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 MADDQ8WXG6 1647 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 PNMA6EA0A0J9YXQ4 647 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 HMGB1P1B2RPK0 211 aaPredicted RBP4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 NKX2-8O15522 239 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 RGS14O43566 566 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 KLKB1P03952 638 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 CYP1A2P05177 515 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 HOXC6P09630 235 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 RFX5P48382 616 aaPredicted RBP4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 TAS2R50P59544 299 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 CRYZQ08257 329 aaKnown RBP4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 GPR18Q14330 331 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 GALNT3Q14435 633 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 BRD3Q15059 726 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 AAK1Q2M2I8 961 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 DGKKQ5KSL6 1271 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 ANKRD40Q6AI12 368 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 HIBCHQ6NVY1 386 aaPredicted RBP4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 SLC16A12Q6ZSM3 486 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 DGKHQ86XP1 1220 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 UBE2Q2Q8WVN8 375 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 ADAD1Q96M93 576 aaKnown RBP4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 MPHOSPH6Q99547 160 aaKnown RBP4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 SEZ6LQ9BYH1 1024 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 EPS8L2Q9H6S3 715 aa4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.5□□□□□ -1.69
SMCHD1-208ENST00000583344 A0A087WYN8 130 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 OR6C75A6NL08 312 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 PCDH17O14917 1159 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 MSI1O43347 362 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 NCK2O43639 380 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 CER1O95813 267 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 LCATP04180 440 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 MYL1P05976 194 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 RARSP54136 660 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 RPL36AP83881 106 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 Q0VFX4 171 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 GPS2Q13227 327 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 IZUMO4Q1ZYL8 232 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 SLC35G1Q2M3R5 365 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 ARL13BQ3SXY8 428 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 ARL13AQ5H913 290 aaPredicted RBP4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 C10orf76Q5T2E6 689 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 RTL10Q7L3V2 364 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 MDGA2Q7Z553 956 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 CUZD1Q86UP6 607 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 TTC30AQ86WT1 665 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 ADPRHL1Q8NDY3 354 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 RWDD1Q9H446 243 aaPredicted RBP4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 SFXN1Q9H9B4 322 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 TXNRD2Q9NNW7 524 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 PLSCR4Q9NRQ2 329 aa4.49□□□□□ -1.69
SMCHD1-208ENST00000583344 DTNAQ9Y4J8 743 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms