RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 CBWD6Q4V339 395 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 CBWD3Q5JTY5 395 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 CBWD5Q5RIA9 395 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 CCDC81Q6ZN84 652 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 KRBA2Q6ZNG9 492 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 GUF1Q8N442 669 aaKnown RBP12.66□□□□□ -0.38
TOP3A-215ENST00000583328 TMEM145Q8NBT3 493 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 IFI44Q8TCB0 444 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 TFAP2BQ92481 460 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 FAM149B1Q96BN6 582 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 SLC39A13Q96H72 371 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 CCDC34Q96HJ3 373 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 SLC46A1Q96NT5 459 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 DUSP23Q9BVJ7 150 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 USP29Q9HBJ7 922 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 PPM1HQ9ULR3 514 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 SATB2Q9UPW6 733 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 NAALADL1Q9UQQ1 740 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 A0A1W2PQU0 124 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 F5H5T6 163 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 SCAMP1O15126 338 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 CETN3O15182 167 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 FYNP06241 537 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 PAEPP09466 180 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 TBXAS1P24557 533 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-215ENST00000583328 OXCT1P55809 520 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 DLG2Q15700 870 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 ZC3H12AQ5D1E8 599 aaKnown RBP12.65□□□□□ -0.38
TOP3A-215ENST00000583328 DCAF17Q5H9S7 520 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-215ENST00000583328 FOXR1Q6PIV2 292 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 IGF2-ASQ6U949 168 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 TMEM270Q6UE05 265 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 OR13H1Q8NG92 308 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 ERCC4Q92889 916 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-215ENST00000583328 TIGD1Q96MW7 591 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 PPP1R9BQ96SB3 815 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 FAM117AQ9C073 453 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 CAAP1Q9H8G2 361 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 FZD3Q9NPG1 666 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 WDR70Q9NW82 654 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 DNAJC28Q9NX36 388 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 SLC12A6Q9UHW9 1150 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 SLC25A13Q9UJS0 675 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 SSUH2Q9Y2M2 353 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 PCDHB4Q9Y5E5 795 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 HECTD1Q9ULT8 2610 aa12.65□□□□□ -0.38
TOP3A-215ENST00000583328 LY6G6EA0A0G2JKS1 128 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 CPED1A4D0V7 1026 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 K7ESM1 405 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 MCF2LO15068 1137 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 ALOX15BO15296 676 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 ATP9BO43861 1147 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 PRR29P0C7W0 189 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 TGM2P21980 687 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 HNRNPA2B1P22626 353 aaKnown RBP12.64□□□□□ -0.39
TOP3A-215ENST00000583328 VASPP50552 380 aaPredicted RBP12.64□□□□□ -0.39
TOP3A-215ENST00000583328 PLK1P53350 603 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 CLDN2P57739 230 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 TAS2R38P59533 333 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 HNRNPKP61978 463 aaKnown RBP eCLIP12.64□□□□□ -0.39
TOP3A-215ENST00000583328 CCDC15Q0P6D6 951 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 NFATC3Q12968 1075 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 STILQ15468 1287 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 EDRF1Q3B7T1 1238 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 ZSCAN23Q3MJ62 389 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 ZNF542PQ5EBM4 170 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 NEK5Q6P3R8 708 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 TAC4Q86UU9 113 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 HORMAD1Q86X24 394 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 CIR1Q86X95 450 aaPredicted RBP12.64□□□□□ -0.39
TOP3A-215ENST00000583328 CCAR2Q8N163 923 aaKnown RBP12.64□□□□□ -0.39
TOP3A-215ENST00000583328 ATP6V0D2Q8N8Y2 350 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 RNF34Q969K3 372 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 GRAMD1AQ96CP6 724 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 IFT43Q96FT9 208 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 ATXN7L3BQ96GX2 97 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 BTN2A3PQ96KV6 586 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 LMBRD1Q9NUN5 540 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.64□□□□□ -0.39
TOP3A-215ENST00000583328 IL17BQ9UHF5 180 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 COQ4Q9Y3A0 265 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 FARP1Q9Y4F1 1045 aaPredicted RBP12.64□□□□□ -0.39
TOP3A-215ENST00000583328 U3KQA8 63 aa12.64□□□□□ -0.39
TOP3A-215ENST00000583328 SART1O43290 800 aaKnown RBP12.63□□□□□ -0.39
TOP3A-215ENST00000583328 NEBLO76041 1014 aa12.63□□□□□ -0.39
TOP3A-215ENST00000583328 PCDH8O95206 1070 aa12.63□□□□□ -0.39
TOP3A-215ENST00000583328 BRD2P25440 801 aaKnown RBP12.63□□□□□ -0.39
TOP3A-215ENST00000583328 CDKN3Q16667 212 aa12.63□□□□□ -0.39
TOP3A-215ENST00000583328 ZNF284Q2VY69 593 aa12.63□□□□□ -0.39
TOP3A-215ENST00000583328 ZCWPW2Q504Y3 356 aa12.63□□□□□ -0.39
TOP3A-215ENST00000583328 RABGAP1LQ5R372 815 aa12.63□□□□□ -0.39
TOP3A-215ENST00000583328 PIP5KL1Q5T9C9 394 aa12.63□□□□□ -0.39
TOP3A-215ENST00000583328 SYPL2Q5VXT5 272 aa12.63□□□□□ -0.39
TOP3A-215ENST00000583328 Q6ZSR6 202 aa12.63□□□□□ -0.39
TOP3A-215ENST00000583328 Q6ZVU0 165 aa12.63□□□□□ -0.39
TOP3A-215ENST00000583328 EFL1Q7Z2Z2 1120 aaKnown RBP12.63□□□□□ -0.39
TOP3A-215ENST00000583328 ARL14Q8N4G2 192 aa12.63□□□□□ -0.39
TOP3A-215ENST00000583328 UBR7Q8N806 425 aa12.63□□□□□ -0.39
TOP3A-215ENST00000583328 TPCN2Q8NHX9 752 aa12.63□□□□□ -0.39
TOP3A-215ENST00000583328 NOX5Q96PH1 765 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms