RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 PHF21BQ96EK2 531 aa4.41□□□□□ -1.7
COPS3-217ENST00000583160 ELAC1Q9H777 363 aaKnown RBP4.41□□□□□ -1.7
COPS3-217ENST00000583160 SEPSECSQ9HD40 501 aaKnown RBP4.41□□□□□ -1.7
COPS3-217ENST00000583160 CD93Q9NPY3 652 aa4.41□□□□□ -1.7
COPS3-217ENST00000583160 TMEM248Q9NWD8 314 aa4.41□□□□□ -1.7
COPS3-217ENST00000583160 ZNF112Q9UJU3 913 aa4.41□□□□□ -1.7
COPS3-217ENST00000583160 FZD10Q9ULW2 581 aa4.41□□□□□ -1.7
COPS3-217ENST00000583160 DAPP1Q9UN19 280 aa4.41□□□□□ -1.7
COPS3-217ENST00000583160 ICKQ9UPZ9 632 aa4.41□□□□□ -1.7
COPS3-217ENST00000583160 LRCH1Q9Y2L9 728 aa4.41□□□□□ -1.7
COPS3-217ENST00000583160 CCDC180Q9P1Z9 1646 aa4.4□□□□□ -1.7
COPS3-217ENST00000583160 A0A087WV62 115 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 SKAP2O75563 359 aaPredicted RBP4.4□□□□□ -1.71
COPS3-217ENST00000583160 HLA-DQA2P01906 255 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 GSTM2P28161 218 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 PMS2P54278 862 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 TMPRSS3P57727 454 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 ZP1P60852 638 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 AP2B1P63010 937 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 ZACNQ401N2 412 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 C5orf22Q49AR2 442 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 NADSYN1Q6IA69 706 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 RAB11FIP2Q7L804 512 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 ZNF367Q7RTV3 350 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 SLC44A2Q8IWA5 706 aaPredicted RBP4.4□□□□□ -1.71
COPS3-217ENST00000583160 CCDC117Q8IWD4 279 aaPredicted RBP4.4□□□□□ -1.71
COPS3-217ENST00000583160 VPS52Q8N1B4 723 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 SPATA3Q8NHX4 192 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 SCAMP5Q8TAC9 235 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 SLC2A12Q8TD20 617 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 KCNJ9Q92806 393 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 TRIM31Q9BZY9 425 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 CATSPERBQ9H7T0 1116 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 Q9N2J8 555 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 CHST12Q9NRB3 414 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 ZDHHC7Q9NXF8 308 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 C19orf53Q9UNZ5 99 aaPredicted RBP4.4□□□□□ -1.71
COPS3-217ENST00000583160 RAP2CQ9Y3L5 183 aa4.4□□□□□ -1.71
COPS3-217ENST00000583160 SCN5AQ14524 2016 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 CLEC18AA5D8T8 446 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 SAC3D1A6NKF1 404 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 SERPINB3P29508 390 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 TYK2P29597 1187 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 PDIA3P30101 505 aaKnown RBP4.39□□□□□ -1.71
COPS3-217ENST00000583160 GALNT1Q10472 559 aaPredicted RBP4.39□□□□□ -1.71
COPS3-217ENST00000583160 ALKBH1Q13686 389 aaKnown RBP4.39□□□□□ -1.71
COPS3-217ENST00000583160 GALNTL6Q49A17 601 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 PRAMEF19Q5SWL8 479 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 TTC22Q5TAA0 569 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 TMEM71Q6P5X7 295 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 KLHL17Q6TDP4 642 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 Q6ZSV7 163 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 RNF144BQ7Z419 303 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 RBM23Q86U06 439 aaKnown RBP4.39□□□□□ -1.71
COPS3-217ENST00000583160 ATG16L2Q8NAA4 619 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 CLEC18CQ8NCF0 446 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 BICD2Q8TD16 824 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 CPT1BQ92523 772 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 ARRDC3Q96B67 414 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 C3orf49Q96BT1 292 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 PIGSQ96S52 555 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 WDR12Q9GZL7 423 aaKnown RBP4.39□□□□□ -1.71
COPS3-217ENST00000583160 PABPC3Q9H361 631 aaKnown RBP4.39□□□□□ -1.71
COPS3-217ENST00000583160 PRDM8Q9NQV8 689 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 SLC22A11Q9NSA0 550 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 PLEKHB1Q9UF11 243 aaPredicted RBP4.39□□□□□ -1.71
COPS3-217ENST00000583160 BAG5Q9UL15 447 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 RCE1Q9Y256 329 aa4.39□□□□□ -1.71
COPS3-217ENST00000583160 NPIPB13A6NJU9 1138 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 NPIPB5A8MRT5 1133 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 NPIPB4C9JG80 1138 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 MS4A18H0YCH9 400 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 SYT5O00445 386 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 LIASO43766 372 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 TMCC1O94876 653 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 SETSIPP0DME0 302 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 UNGP13051 313 aaPredicted RBP4.38□□□□□ -1.71
COPS3-217ENST00000583160 SERPINA4P29622 427 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 SERPINF1P36955 418 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 AVPR1AP37288 418 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 PPP3CCP48454 512 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 TNFAIP2Q03169 654 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 DSC1Q08554 894 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 PKP1Q13835 747 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 DCTN1Q14203 1278 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 PUM3Q15397 648 aaKnown RBP4.38□□□□□ -1.71
COPS3-217ENST00000583160 FSCBQ5H9T9 825 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 FAM83HQ6ZRV2 1179 aaPredicted RBP4.38□□□□□ -1.71
COPS3-217ENST00000583160 HORMAD2Q8N7B1 307 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 ADAMTS14Q8WXS8 1223 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 ZNF333Q96JL9 665 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 LMLNQ96KR4 655 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 APOLD1Q96LR9 279 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 TM6SF1Q9BZW5 370 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.38□□□□□ -1.71
COPS3-217ENST00000583160 CDH22Q9UJ99 828 aa4.38□□□□□ -1.71
COPS3-217ENST00000583160 GLUD1P00367 558 aa4.37□□□□□ -1.71
COPS3-217ENST00000583160 CYP21A2P08686 494 aa4.37□□□□□ -1.71
COPS3-217ENST00000583160 FCGR2AP12318 317 aa4.37□□□□□ -1.71
COPS3-217ENST00000583160 LYL1P12980 280 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms