RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	TFF3	Q07654	80 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	EHHADH	Q08426	723 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	DMTN	Q08495	405 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	DOC2B	Q14184	412 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	ZBTB6	Q15916	424 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	CHRFAM7A	Q494W8	412 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	FNDC3B	Q53EP0	1204 aa	Known RBP	5.15	□□□□□ -1.59
MSI2-216	ENST00000582772		Q5PR19	223 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	CERCAM	Q5T4B2	595 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	SNX30	Q5VWJ9	437 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	KYAT3	Q6YP21	454 aa	Known RBP	5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	DENND5B	Q6ZUT9	1274 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	PIM3	Q86V86	326 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	SLC47A2	Q86VL8	602 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	ZBTB8OS	Q8IWT0	167 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	C4orf19	Q8IY42	314 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	LRRC75A-AS1	Q8N1F1	130 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	THEM5	Q8N1Q8	247 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	ZNF366	Q8N895	744 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	RCBTB1	Q8NDN9	531 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	COG1	Q8WTW3	980 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	CCDC127	Q96BQ5	260 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	RBMXL1	Q96E39	390 aa	Known RBP	5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	CCDC74B	Q96LY2	380 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	NOX5	Q96PH1	765 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	TRAPPC9	Q96Q05	1148 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	NACC1	Q96RE7	527 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	LRRC61	Q9BV99	259 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	CIPC	Q9C0C6	399 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	GLT8D2	Q9H1C3	349 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	CLEC4M	Q9H2X3	399 aa	Predicted RBP	5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	C1orf115	Q9H7X2	142 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	NPDC1	Q9NQX5	325 aa	Predicted RBP	5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	WRAP73	Q9P2S5	460 aa	Predicted RBP	5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	SUN2	Q9UH99	717 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	SERTAD1	Q9UHV2	236 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	CDC42EP3	Q9UKI2	254 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	TNFSF13B	Q9Y275	285 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	TENM2	Q9NT68	2774 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	ARGFX	A6NJG6	315 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	C21orf140	B9A014	251 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	CLDN4	O14493	209 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	SMAD7	O15105	426 aa	Known RBP	5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	YY2	O15391	372 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	TLX2	O43763	284 aa	Predicted RBP	5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	DGAT1	O75907	488 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	ADH1B	P00325	375 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	ANXA6	P08133	673 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	HOXD4	P09016	255 aa	Predicted RBP	5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	HNRNPA2B1	P22626	353 aa	Known RBP	5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	YWHAB	P31946	246 aa	Known RBP	5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	LIMK2	P53671	638 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	NLRP5	P59047	1200 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	MC2R	Q01718	297 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	SPAG1	Q07617	926 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	PDIA5	Q14554	519 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	POM121L1P	Q3SYA9	428 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	MAP9	Q49MG5	647 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	B3GNTL1	Q67FW5	361 aa	Predicted RBP	5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	FAAH2	Q6GMR7	532 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	CENPQ	Q7L2Z9	268 aa	Predicted RBP	5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	CATSPER3	Q86XQ3	398 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	CCDC117	Q8IWD4	279 aa	Predicted RBP	5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	GPR156	Q8NFN8	814 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	PANK1	Q8TE04	598 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	ADAMTS18	Q8TE60	1221 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	OVCA2	Q8WZ82	227 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	LARP6	Q9BRS8	491 aa	Known RBP	5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	TCHP	Q9BT92	498 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	FBXO8	Q9NRD0	319 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	RASSF1	Q9NS23	344 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	ZBTB40	Q9NUA8	1239 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	IL17C	Q9P0M4	197 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	PLA2G4C	Q9UP65	541 aa		5.14	□□□□□ -1.59
MSI2-216	ENST00000582772	LRRIQ4	A6NIV6	560 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	PGR	P06401	933 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	THRA	P10827	490 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	RLBP1	P12271	317 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	AKT2	P31751	481 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	SLC8A1	P32418	973 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	ADK	P55263	362 aa	Known RBP	5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	KCNK10	P57789	538 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	TSPY1	Q01534	308 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	ARID5A	Q03989	594 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	NR1D2	Q14995	579 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	SEPT7	Q16181	437 aa	Known RBP	5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	HNRNPA1L2	Q32P51	320 aa	Known RBP	5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	C8orf34	Q49A92	452 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	NEK5	Q6P3R8	708 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	VSTM1	Q6UX27	236 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	C12orf54	Q6X4T0	127 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772		Q6ZNB5	142 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772		Q6ZSR6	202 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	OTUD6A	Q7L8S5	288 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	CXorf67	Q86X51	503 aa	Predicted RBP	5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	CPSF7	Q8N684	471 aa	Known RBP	5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	KDM1B	Q8NB78	822 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	TMC2	Q8TDI7	906 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	WFIKKN2	Q8TEU8	576 aa		5.13	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms