RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 CEP44Q9C0F1 390 aa12.91□□□□□ -0.34
CDK5RAP3-222ENST00000581708 C6orf106Q9H6K1 298 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-222ENST00000581708 SEPT11Q9NVA2 429 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-222ENST00000581708 DONSONQ9NYP3 566 aa12.91□□□□□ -0.34
CDK5RAP3-222ENST00000581708 ZNF212Q9UDV6 495 aa12.91□□□□□ -0.34
CDK5RAP3-222ENST00000581708 OR12D3Q9UGF7 316 aa12.91□□□□□ -0.34
CDK5RAP3-222ENST00000581708 ACACBO00763 2458 aa12.91□□□□□ -0.34
CDK5RAP3-222ENST00000581708 TCRBV5S1A1TA0A578 114 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 DFNA5O60443 496 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 SRGAP2O75044 1071 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 GJB3O75712 270 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 RNASEH2AO75792 299 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 CNTN5O94779 1100 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 CER1O95813 267 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 SERPINC1P01008 464 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 IL1BP01584 269 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 GZMAP12544 262 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 TNFAIP3P21580 790 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 MAOBP27338 520 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 HTR7P34969 479 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 NOVA1P51513 510 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 GALCP54803 685 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 HDAC4P56524 1084 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 GEMIN4P57678 1058 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 SHC2P98077 582 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 NR1I3Q14994 352 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 DLG2Q15700 870 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 UAP1L1Q3KQV9 507 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 ACCSLQ4AC99 568 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 PPP1R15BQ5SWA1 713 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 ARTNQ5T4W7 220 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 SH3PXD2AQ5TCZ1 1133 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 MANEALQ5VSG8 457 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 PSAPL1Q6NUJ1 521 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 WDR59Q6PJI9 974 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 PLPP6Q8IY26 295 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 MCOLN2Q8IZK6 566 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 STK40Q8N2I9 435 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 ZCCHC9Q8N567 271 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 OR52K2Q8NGK3 314 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 JOSD2Q8TAC2 188 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 FAM172AQ8WUF8 416 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 SKA1Q96BD8 255 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 BIRC7Q96CA5 298 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 PSMB7Q99436 277 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 MIR1-1HGQ9H1L0 117 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 NEUROG2Q9H2A3 272 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 MTG2Q9H4K7 406 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 EIF2B4Q9UI10 523 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 VPS51Q9UID3 782 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 PPM1HQ9ULR3 514 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 PCDHGB2Q9Y5G2 931 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 BZW2Q9Y6E2 419 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 CHD8Q9HCK8 2581 aa12.9□□□□□ -0.34
CDK5RAP3-222ENST00000581708 TPRP12270 2363 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 NYNRINQ9P2P1 1898 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 LRRC53A6NM62 1247 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 EIF3CLB5ME19 914 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 PLEKP08567 350 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 SRCP12931 536 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 PMLP29590 882 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 L1CAMP32004 1257 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 GGCXP38435 758 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 PSMD8P48556 350 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 RACK1P63244 317 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 GNA12Q03113 381 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 GRIK2Q13002 908 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 ASIC2Q16515 512 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 CDO1Q16878 200 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 C15orf59Q2T9L4 293 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 N4BP2L1Q5TBK1 243 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 SFMBT2Q5VUG0 894 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 NEK5Q6P3R8 708 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 SLFN11Q7Z7L1 901 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 AADATQ8N5Z0 425 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 ATP11CQ8NB49 1132 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 TMIEQ8NEW7 156 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 SYN2Q92777 582 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 TBC1D31Q96DN5 1066 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 TRIM11Q96F44 468 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 EIF3CQ99613 913 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 NCAPGQ9BPX3 1015 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 MAGEH1Q9H213 219 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 PARVAQ9NVD7 372 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 TMEM248Q9NWD8 314 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 MPP6Q9NZW5 540 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 NUMA1Q14980 2115 aa12.89□□□□□ -0.35
CDK5RAP3-222ENST00000581708 PCNX2A6NKB5 2137 aa12.88□□□□□ -0.35
CDK5RAP3-222ENST00000581708 A0A1W2PP55 124 aa12.88□□□□□ -0.35
CDK5RAP3-222ENST00000581708 A0A1W2PPC4 97 aa12.88□□□□□ -0.35
CDK5RAP3-222ENST00000581708 A0A1W2PQJ5 194 aa12.88□□□□□ -0.35
CDK5RAP3-222ENST00000581708 SYCE3A1L190 88 aa12.88□□□□□ -0.35
CDK5RAP3-222ENST00000581708 ZSCAN5CA6NGD5 496 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-222ENST00000581708 GOLGA6L19H0YKK7 550 aa12.88□□□□□ -0.35
CDK5RAP3-222ENST00000581708 LATO43561 262 aa12.88□□□□□ -0.35
CDK5RAP3-222ENST00000581708 FSBPO95073 299 aa12.88□□□□□ -0.35
CDK5RAP3-222ENST00000581708 PRNPP04156 253 aa12.88□□□□□ -0.35
CDK5RAP3-222ENST00000581708 IGHV4-34P06331 123 aa12.88□□□□□ -0.35
CDK5RAP3-222ENST00000581708 DRD3P35462 400 aa12.88□□□□□ -0.35
CDK5RAP3-222ENST00000581708 RECQLP46063 649 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms