RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 AP5B1Q2VPB7 878 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 GXYLT1Q4G148 440 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 LRRC8DQ7L1W4 858 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 C8orf58Q8NAV2 365 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 OR52N4Q8NGI2 321 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 OSR1Q8TAX0 266 aaPredicted RBP5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 MAP4K1Q92918 833 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 ZBTB10Q96DT7 871 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 ZNF48Q96MX3 618 aaPredicted RBP5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 FAM118BQ9BPY3 351 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 MROH8Q9H579 483 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 TXNRD2Q9NNW7 524 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 CNOT7Q9UIV1 285 aaKnown RBP5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 DTX4Q9Y2E6 619 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 TMEM98Q9Y2Y6 226 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 TCRBV7S3A2A0A539 114 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 SLC22A23A1A5C7 686 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 CCNT1O60563 726 aaKnown RBP5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 TYK2P29597 1187 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 HOXA7P31268 230 aaPredicted RBP5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 HNF1BP35680 557 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 NAA25Q14CX7 972 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 GPR68Q15743 365 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 C10orf76Q5T2E6 689 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 ZNF813Q6ZN06 617 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 GALNT7Q86SF2 657 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 GALNT16Q8N428 558 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 TSPYL6Q8N831 410 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 ARL14EPQ8N8R7 260 aaPredicted RBP5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 PCYOX1LQ8NBM8 494 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 LSM14AQ8ND56 463 aaKnown RBP5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 PPHLN1Q8NEY8 458 aaKnown RBP5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 KAT2BQ92831 832 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 ZUFSPQ96AP4 578 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 SKA1Q96BD8 255 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 RNF125Q96EQ8 232 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 APOPT1Q96IL0 206 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 CD180Q99467 661 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 UNC45AQ9H3U1 944 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 JMJD4Q9H9V9 463 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 PREBQ9HCU5 417 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 ERVK-5Q9HDB9 667 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 SMC4Q9NTJ3 1288 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 ALKBH4Q9NXW9 302 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 KLHL13Q9P2N7 655 aa5.11□□□□□ -1.59
SMCHD1-205ENST00000581383 FAM90A7PA6NKC0 464 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 FAM90A22PA8MWA6 464 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 FAM90A12PA8MX19 464 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 FAM90A23PA8MXZ1 464 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 GUCY1B2O75343 617 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 SGPL1O95470 568 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 CD4P01730 458 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 RPS6KB1P23443 525 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 ABCD3P28288 659 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 TKTP29401 623 aaKnown RBP5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 GGT5P36269 586 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 RPP30P78346 268 aaKnown RBP5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 ZBTB16Q05516 673 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 UBAP2Q5T6F2 1119 aaKnown RBP5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 ACAD10Q6JQN1 1059 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 SLC22A25Q6T423 547 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 RSRC2Q7L4I2 434 aaKnown RBP5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 ADGRG6Q86SQ4 1221 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 KLBQ86Z14 1044 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 PAQR4Q8N4S7 273 aaPredicted RBP5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 FAM47BQ8NA70 645 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 ZFPM2Q8WW38 1151 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 RUFY2Q8WXA3 655 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 NCSTNQ92542 709 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 AGXT2Q9BYV1 514 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 ZHX3Q9H4I2 956 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 TMEM248Q9NWD8 314 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 IRAK4Q9NWZ3 460 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 HDAC6Q9UBN7 1215 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 IPO11Q9UI26 975 aaKnown RBP5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 SLC8A2Q9UPR5 921 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 TNFSF13BQ9Y275 285 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 CYP46A1Q9Y6A2 500 aa5.1□□□□□ -1.59
SMCHD1-205ENST00000581383 CYP2D7A0A087X1C5 515 aa5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 CXorf65A6NEN9 183 aa5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 TULP3O75386 442 aa5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 NFATC1O95644 943 aa5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 TOP3BO95985 862 aaKnown RBP5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 CD72P21854 359 aa5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 CASP6P55212 293 aa5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 GEMIN4P57678 1058 aaKnown RBP5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 LMOD3Q0VAK6 560 aa5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 CAMK1Q14012 370 aa5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 SIM2Q14190 667 aaPredicted RBP5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 SEMA3AQ14563 771 aa5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 IL13RA2Q14627 380 aa5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 BAK1Q16611 211 aa5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 NAPEPLDQ6IQ20 393 aa5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 SHC4Q6S5L8 630 aa5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 MRPL10Q7Z7H8 261 aaKnown RBP5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 TBC1D22AQ8WUA7 517 aa5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 SH3KBP1Q96B97 665 aa5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 CLSTN3Q9BQT9 956 aa5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 SCNM1Q9BWG6 230 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms