RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ACTRT1Q8TDG2 376 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 CASKIN2Q8WXE0 1202 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 EDAQ92838 391 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 BHMTQ93088 406 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 HDAC11Q96DB2 347 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 C16orf45Q96MC5 204 aaPredicted RBP10.65□□□□□ -0.7
CCDC47-203ENST00000580986 ZNF599Q96NL3 588 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 TSGA13Q96PP4 275 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 TUBB2BQ9BVA1 445 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 NDFIP2Q9NV92 336 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 ETNK2Q9NVF9 386 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 DTLQ9NZJ0 730 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 DNAI1Q9UI46 699 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 MUTYHQ9UIF7 546 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 INTS6Q9UL03 887 aaKnown RBP10.65□□□□□ -0.7
CCDC47-203ENST00000580986 CLEC4EQ9ULY5 219 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 SAR1BQ9Y6B6 198 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 HACD1B0YJ81 288 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 RASA4BC9J798 803 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 PPP1R12AO14974 1030 aaPredicted RBP10.64□□□□□ -0.71
CCDC47-203ENST00000580986 RASA4O43374 803 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 MFSD11O43934 449 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 ATP5BP06576 529 aaKnown RBP10.64□□□□□ -0.71
CCDC47-203ENST00000580986 SRPRAP08240 638 aaKnown RBP10.64□□□□□ -0.71
CCDC47-203ENST00000580986 DLDP09622 509 aaKnown RBP10.64□□□□□ -0.71
CCDC47-203ENST00000580986 KRT10P13645 584 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 ALADP13716 330 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 HNRNPLP14866 589 aaKnown RBP eCLIP10.64□□□□□ -0.71
CCDC47-203ENST00000580986 CASQ1P31415 396 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 CD70P32970 193 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 CSKP41240 450 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 GARSP41250 739 aaKnown RBP10.64□□□□□ -0.71
CCDC47-203ENST00000580986 GALK1P51570 392 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 GRSF1Q12849 480 aaKnown RBP eCLIP10.64□□□□□ -0.71
CCDC47-203ENST00000580986 CCINQ13939 588 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 RFTN1Q14699 578 aaPredicted RBP10.64□□□□□ -0.71
CCDC47-203ENST00000580986 PDK1Q15118 436 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 NOMO1Q15155 1222 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 GEN1Q17RS7 908 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 FUT11Q495W5 492 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 INO80DQ53TQ3 878 aaPredicted RBP10.64□□□□□ -0.71
CCDC47-203ENST00000580986 RNF219Q5W0B1 726 aaPredicted RBP10.64□□□□□ -0.71
CCDC47-203ENST00000580986 TIGD7Q6NT04 549 aaPredicted RBP10.64□□□□□ -0.71
CCDC47-203ENST00000580986 DRICH1Q6PGQ1 229 aaPredicted RBP10.64□□□□□ -0.71
CCDC47-203ENST00000580986 TXNDC11Q6PKC3 985 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 RFX6Q8HWS3 928 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 NAT16Q8N8M0 369 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 UCMAQ8WVF2 138 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 FAM3CQ92520 227 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 P3H4Q92791 437 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 PSMB7Q99436 277 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 IER2Q9BTL4 223 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 MUC3BQ9H195 1237 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 HOMER3Q9NSC5 361 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 ELOVL2Q9NXB9 296 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 AMACRQ9UHK6 382 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 VPS28Q9UK41 221 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 FBXL21Q9UKT6 434 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 HPCAL4Q9UM19 191 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 HS3ST2Q9Y278 367 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 TRIOO75962 3097 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 NCOR1O75376 2440 aa10.64□□□□□ -0.71
CCDC47-203ENST00000580986 NYNRINQ9P2P1 1898 aaKnown RBP10.64□□□□□ -0.71
CCDC47-203ENST00000580986 A0A0D9SEW6 157 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 KANSL1LA0AUZ9 987 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 KRBA1A5PL33 1030 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 ESPNB1AK53 854 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 PGRMC1O00264 195 aaKnown RBP10.63□□□□□ -0.71
CCDC47-203ENST00000580986 MTSS1O43312 755 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 KDELR3O43731 214 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 PRAMEF11O60813 436 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 ZMPSTE24O75844 475 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 POLR2EP19388 210 aaKnown RBP10.63□□□□□ -0.71
CCDC47-203ENST00000580986 CCNCP24863 283 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 MZF1P28698 734 aaPredicted RBP10.63□□□□□ -0.71
CCDC47-203ENST00000580986 MAGEA9P43362 315 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 SOX9P48436 509 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 MRPS21P82921 87 aaKnown RBP10.63□□□□□ -0.71
CCDC47-203ENST00000580986 GBE1Q04446 702 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 IL10RBQ08334 325 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 ADCY2Q08462 1091 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 PPIDQ08752 370 aaKnown RBP10.63□□□□□ -0.71
CCDC47-203ENST00000580986 ZNF211Q13398 564 aaPredicted RBP10.63□□□□□ -0.71
CCDC47-203ENST00000580986 ENPP2Q13822 863 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 LRRC32Q14392 662 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 DGKKQ5KSL6 1271 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 KAZNQ674X7 775 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 TMEM215Q68D42 235 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 MBLAC2Q68D91 279 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 RETSATQ6NUM9 610 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 SYT10Q6XYQ8 523 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 TRMT11Q7Z4G4 463 aaKnown RBP10.63□□□□□ -0.71
CCDC47-203ENST00000580986 HMCESQ96FZ2 354 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 HERPUD2Q9BSE4 406 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 SLC39A8Q9C0K1 460 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 PDFQ9HBH1 243 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 ATP13A1Q9HD20 1204 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 LTB4R2Q9NPC1 389 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 F5P12259 2224 aa10.63□□□□□ -0.71
CCDC47-203ENST00000580986 TBC1D3BA6NDS4 549 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms