RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 RTL3Q8N8U3 475 aaKnown RBP16.81■□□□□ 0.28
IFT20-210ENST00000580357 TC2NQ8N9U0 490 aa16.81■□□□□ 0.28
IFT20-210ENST00000580357 ATP11CQ8NB49 1132 aa16.81■□□□□ 0.28
IFT20-210ENST00000580357 CADM4Q8NFZ8 388 aa16.81■□□□□ 0.28
IFT20-210ENST00000580357 FRS2Q8WU20 508 aa16.81■□□□□ 0.28
IFT20-210ENST00000580357 ERLEC1Q96DZ1 483 aa16.81■□□□□ 0.28
IFT20-210ENST00000580357 PSMB7Q99436 277 aa16.81■□□□□ 0.28
IFT20-210ENST00000580357 ACE2Q9BYF1 805 aaPredicted RBP16.81■□□□□ 0.28
IFT20-210ENST00000580357 TRIM7Q9C029 511 aa16.81■□□□□ 0.28
IFT20-210ENST00000580357 PCED1AQ9H1Q7 454 aa16.81■□□□□ 0.28
IFT20-210ENST00000580357 DHX35Q9H5Z1 703 aaKnown RBP16.81■□□□□ 0.28
IFT20-210ENST00000580357 ATP13A1Q9HD20 1204 aa16.81■□□□□ 0.28
IFT20-210ENST00000580357 CTTNBP2NLQ9P2B4 639 aa16.81■□□□□ 0.28
IFT20-210ENST00000580357 VPS51Q9UID3 782 aa16.81■□□□□ 0.28
IFT20-210ENST00000580357 MBD1Q9UIS9 605 aaPredicted RBP16.81■□□□□ 0.28
IFT20-210ENST00000580357 CYP8B1Q9UNU6 501 aa16.81■□□□□ 0.28
IFT20-210ENST00000580357 BCLAF3A2AJT9 711 aaKnown RBP16.8■□□□□ 0.28
IFT20-210ENST00000580357 ZSCAN5CA6NGD5 496 aaPredicted RBP16.8■□□□□ 0.28
IFT20-210ENST00000580357 CBX4O00257 560 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 DAPK3O43293 454 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 RAMP2O60895 175 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 ADH1BP00325 375 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 BCKDHBP21953 392 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 DHPSP49366 369 aaPredicted RBP16.8■□□□□ 0.28
IFT20-210ENST00000580357 TPI1P60174 286 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 ELAVL3Q14576 367 aaKnown RBP16.8■□□□□ 0.28
IFT20-210ENST00000580357 SYCP2LQ5T4T6 812 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 FAM46CQ5VWP2 391 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 DCLK2Q8N568 766 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 ZNF564Q8TBZ8 553 aaPredicted RBP16.8■□□□□ 0.28
IFT20-210ENST00000580357 TEKT4Q8WW24 435 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 ARHGEF2Q92974 986 aaKnown RBP16.8■□□□□ 0.28
IFT20-210ENST00000580357 ZNF419Q96HQ0 510 aaPredicted RBP16.8■□□□□ 0.28
IFT20-210ENST00000580357 PANX2Q96RD6 677 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 FAM129BQ96TA1 746 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 SNRNP25Q9BV90 132 aaKnown RBP16.8■□□□□ 0.28
IFT20-210ENST00000580357 MAGEB5Q9BZ81 275 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 CEP44Q9C0F1 390 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 SLC6A17Q9H1V8 727 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 ARRDC1-AS1Q9H2J1 176 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 ZWILCHQ9H900 591 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 VPS45Q9NRW7 570 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 DNAI1Q9UI46 699 aa16.8■□□□□ 0.28
IFT20-210ENST00000580357 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 EEF2KO00418 725 aaKnown RBP16.79■□□□□ 0.28
IFT20-210ENST00000580357 MCF2LO15068 1137 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 ZNF806P0C7X5 589 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 C5AR1P21730 350 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 SDHBP21912 280 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 HOXD12P35452 270 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 ARHGAP25P42331 645 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 RECQLP46063 649 aaPredicted RBP16.79■□□□□ 0.28
IFT20-210ENST00000580357 STK19P49842 368 aaPredicted RBP16.79■□□□□ 0.28
IFT20-210ENST00000580357 NDST2P52849 883 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 SPEM2Q0P670 501 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 CCDC15Q0P6D6 951 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 CYP2U1Q7Z449 544 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 RABEPKQ7Z6M1 372 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 RHOT2Q8IXI1 618 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 PLPP6Q8IY26 295 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 TMEFF1Q8IYR6 380 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 UMODL1-AS1Q8N2C9 162 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 OR7D4Q8NG98 312 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 CASKIN2Q8WXE0 1202 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 OR8D1Q8WZ84 308 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 ISG20Q96AZ6 181 aaKnown RBP16.79■□□□□ 0.28
IFT20-210ENST00000580357 TOE1Q96GM8 510 aaKnown RBP16.79■□□□□ 0.28
IFT20-210ENST00000580357 SGK2Q9HBY8 427 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 LUC7LQ9NQ29 371 aaKnown RBP16.79■□□□□ 0.28
IFT20-210ENST00000580357 SEMA4GQ9NTN9 838 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 CKAP5Q14008 2032 aa16.79■□□□□ 0.28
IFT20-210ENST00000580357 EML5Q05BV3 1969 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 DOCK4Q8N1I0 1966 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 PRR5-ARHGAP8B1AHC4 643 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 KDELR3O43731 214 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 SNAP91O60641 907 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 ZMPSTE24O75844 475 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 SRCP12931 536 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 SLC8A1P32418 973 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 CYLC1P35663 651 aaPredicted RBP16.78■□□□□ 0.28
IFT20-210ENST00000580357 ARL4AP40617 200 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 ARHGAP8P85298 464 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 CREB5Q02930 508 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 ZNF33AQ06730 810 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 CST6Q15828 149 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 PARP15Q460N3 678 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 WDR45BQ5MNZ6 344 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 PLA2G2CQ5R387 149 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 LYSMD4Q5XG99 296 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 SYT12Q8IV01 421 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 KIAA2013Q8IYS2 634 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 STK40Q8N2I9 435 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 LZTR1Q8N653 840 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 FRMD1Q8N878 549 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 CEP76Q8TAP6 659 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 GANCQ8TET4 914 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 ARHGEF26Q96DR7 871 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 BTBD1Q9H0C5 482 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 PABPC3Q9H361 631 aaKnown RBP16.78■□□□□ 0.28
IFT20-210ENST00000580357 MTG2Q9H4K7 406 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms