RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, human

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDEL1-208	ENST00000580237	DUOXA1	Q1HG43	343 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	C9orf64	Q5T6V5	341 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	RETSAT	Q6NUM9	610 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	ZNF783	Q6ZMS7	281 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237		Q6ZVU0	165 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	DNAAF5	Q86Y56	855 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	SLC41A1	Q8IVJ1	513 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	ZCCHC9	Q8N567	271 aa	Known RBP	11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	OR7D4	Q8NG98	312 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	CEP76	Q8TAP6	659 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	CENPI	Q92674	756 aa	Predicted RBP	11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	SYN2	Q92777	582 aa	Predicted RBP	11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	OSBPL2	Q9H1P3	480 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	DEF6	Q9H4E7	631 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	MRPL47	Q9HD33	250 aa	Known RBP	11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	TMEM9B	Q9NQ34	198 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	FBXL12	Q9NXK8	326 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	EVL	Q9UI08	416 aa	Predicted RBP	11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	DNAI1	Q9UI46	699 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	VPS51	Q9UID3	782 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	PILRB	Q9UKJ0	227 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	CAPN11	Q9UMQ6	739 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	ASCC3	Q8N3C0	2202 aa	Known RBP	11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	CNOT1	A5YKK6	2376 aa	Known RBP	11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	TMEM131	Q92545	1883 aa		11.17	□□□□□ -0.62
NDEL1-208	ENST00000580237	SHROOM3	Q8TF72	1996 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	PCDH15	Q96QU1	1955 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	ANKRD36	A6QL64	1941 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237		A0A0D9SEW6	157 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	ILVBL	A1L0T0	632 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	DRGX	A6NNA5	263 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	SLC30A4	O14863	429 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	PRPSAP2	O60256	369 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	RAMP2	O60895	175 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	FSBP	O95073	299 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	VAV1	P15498	845 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	RHOQ	P17081	205 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	EPHB2	P29323	1055 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	SLC8A1	P32418	973 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	ACSL1	P33121	698 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	CLCN6	P51797	869 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	AIF1	P55008	147 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	TPI1	P60174	286 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	NRG1	Q02297	640 aa	Predicted RBP	11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	GNA12	Q03113	381 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	DLG2	Q15700	870 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	TSR1	Q2NL82	804 aa	Known RBP	11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	PPP1R15B	Q5SWA1	713 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	STPG1	Q5TH74	334 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	MANEAL	Q5VSG8	457 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	DCAF12L1	Q5VU92	463 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	FAM46C	Q5VWP2	391 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	SPECC1L	Q69YQ0	1117 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	PLEKHA7	Q6IQ23	1121 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	C22orf39	Q6P5X5	142 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	LINGO4	Q6UY18	593 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	USP30	Q70CQ3	517 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	SH2D3C	Q8N5H7	860 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	CADM4	Q8NFZ8	388 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	PTPRN2	Q92932	1015 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	ALG14	Q96F25	216 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	PSMB7	Q99436	277 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	GTPBP2	Q9BX10	602 aa	Known RBP	11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	PCED1A	Q9H1Q7	454 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	CATSPERB	Q9H7T0	1116 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	SGK2	Q9HBY8	427 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	RXFP3	Q9NSD7	469 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	TMEM74B	Q9NUR3	256 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	DLL3	Q9NYJ7	618 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	ADAMTS1	Q9UHI8	967 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	HPCAL4	Q9UM19	191 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	AP4E1	Q9UPM8	1137 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	HS3ST2	Q9Y278	367 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	OR51B4	Q9Y5P0	310 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	SPTBN2	O15020	2390 aa		11.16	□□□□□ -0.62
NDEL1-208	ENST00000580237	WDR87	Q6ZQQ6	2873 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	DMD	P11532	3685 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	LRRC72	A6NJI9	287 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	FAM72C	H0Y354	149 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	ALOX15B	O15296	676 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	ATP9B	O43861	1147 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	SERPINF2	P08697	491 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	SRC	P12931	536 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	C5AR1	P21730	350 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	MAOB	P27338	520 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	L1CAM	P32004	1257 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	DNA2	P51530	1060 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	LIMK1	P53667	647 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	GEMIN4	P57678	1058 aa	Known RBP	11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	IRX4	P78413	519 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	OGDH	Q02218	1023 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	UAP1L1	Q3KQV9	507 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	POM121L1P	Q3SYA9	428 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	FAM72A	Q5TYM5	149 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	DAB2IP	Q5VWQ8	1189 aa		11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.15	□□□□□ -0.62
NDEL1-208	ENST00000580237	HGSNAT	Q68CP4	663 aa		11.15	□□□□□ -0.62

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