RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 PTK2Q05397 1052 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 CNTN1Q12860 1018 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 PAK1Q13153 545 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 PDCLQ13371 301 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 AUHQ13825 339 aaKnown RBP18.39■□□□□ 0.53
MKS1-209ENST00000580127 BECN1Q14457 450 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 ACBD5Q5T8D3 534 aaPredicted RBP18.39■□□□□ 0.53
MKS1-209ENST00000580127 SFMBT2Q5VUG0 894 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 CREBRFQ8IUR6 639 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 FAM174AQ8TBP5 190 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 FAM131CQ96AQ9 280 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 C2orf49Q9BVC5 232 aaPredicted RBP18.39■□□□□ 0.53
MKS1-209ENST00000580127 RRN3Q9NYV6 651 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 ARHGAP20Q9P2F6 1191 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 CTNND2Q9UQB3 1225 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 CLCA2Q9UQC9 943 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 NEMP2A6NFY4 417 aa18.38■□□□□ 0.53
MKS1-209ENST00000580127 BNIP3LO60238 219 aa18.38■□□□□ 0.53
MKS1-209ENST00000580127 VAV1P15498 845 aa18.38■□□□□ 0.53
MKS1-209ENST00000580127 ACP1P24666 158 aa18.38■□□□□ 0.53
MKS1-209ENST00000580127 KRT9P35527 623 aa18.38■□□□□ 0.53
MKS1-209ENST00000580127 CDH4P55283 916 aa18.38■□□□□ 0.53
MKS1-209ENST00000580127 NME3Q13232 169 aa18.38■□□□□ 0.53
MKS1-209ENST00000580127 EIF4EBP2Q13542 120 aaPredicted RBP18.38■□□□□ 0.53
MKS1-209ENST00000580127 LRRC31Q6UY01 552 aa18.38■□□□□ 0.53
MKS1-209ENST00000580127 C11orf57Q6ZUT1 292 aaPredicted RBP18.38■□□□□ 0.53
MKS1-209ENST00000580127 SPATS2Q86XZ4 545 aaKnown RBP18.38■□□□□ 0.53
MKS1-209ENST00000580127 LSM14AQ8ND56 463 aaKnown RBP18.38■□□□□ 0.53
MKS1-209ENST00000580127 SLC2A13Q96QE2 648 aa18.38■□□□□ 0.53
MKS1-209ENST00000580127 VANGL2Q9ULK5 521 aa18.38■□□□□ 0.53
MKS1-209ENST00000580127 MYLKQ15746 1914 aa18.38■□□□□ 0.53
MKS1-209ENST00000580127 ARID1BQ8NFD5 2236 aaPredicted RBP18.38■□□□□ 0.53
MKS1-209ENST00000580127 F9P00740 461 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 PRNPP04156 253 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 ALPPL2P10696 532 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 AKT2P31751 481 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 RECQLP46063 649 aaPredicted RBP18.37■□□□□ 0.53
MKS1-209ENST00000580127 STX17P56962 302 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 MORC3Q14149 939 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 TAF5Q15542 800 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 OR6B2Q6IFH4 312 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 CXorf57Q6NSI4 855 aaKnown RBP18.37■□□□□ 0.53
MKS1-209ENST00000580127 GBP6Q6ZN66 633 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 CIR1Q86X95 450 aaPredicted RBP18.37■□□□□ 0.53
MKS1-209ENST00000580127 DCP2Q8IU60 420 aaKnown RBP18.37■□□□□ 0.53
MKS1-209ENST00000580127 SH2D3CQ8N5H7 860 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 ATP11CQ8NB49 1132 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 TMIEQ8NEW7 156 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 RFFLQ8WZ73 363 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 SIK2Q9H0K1 926 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 WDCPQ9H6R7 721 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 KLHL11Q9NVR0 708 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 SARDHQ9UL12 918 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 TBC1D30Q9Y2I9 924 aa18.37■□□□□ 0.53
MKS1-209ENST00000580127 KPNA3O00505 521 aaPredicted RBP18.36■□□□□ 0.53
MKS1-209ENST00000580127 SLC31A1O15431 190 aa18.36■□□□□ 0.53
MKS1-209ENST00000580127 THEGLP0DJG4 465 aa18.36■□□□□ 0.53
MKS1-209ENST00000580127 NOS2P35228 1153 aa18.36■□□□□ 0.53
MKS1-209ENST00000580127 DUSP3P51452 185 aaPredicted RBP18.36■□□□□ 0.53
MKS1-209ENST00000580127 ARHGAP44Q17R89 818 aa18.36■□□□□ 0.53
MKS1-209ENST00000580127 AGBL4Q5VU57 503 aa18.36■□□□□ 0.53
MKS1-209ENST00000580127 TRIM65Q6PJ69 517 aa18.36■□□□□ 0.53
MKS1-209ENST00000580127 Q6ZVU0 165 aa18.36■□□□□ 0.53
MKS1-209ENST00000580127 ZDHHC17Q8IUH5 632 aa18.36■□□□□ 0.53
MKS1-209ENST00000580127 LSMEM2Q8N112 164 aa18.36■□□□□ 0.53
MKS1-209ENST00000580127 ALG14Q96F25 216 aa18.36■□□□□ 0.53
MKS1-209ENST00000580127 PPP1R16AQ96I34 528 aa18.36■□□□□ 0.53
MKS1-209ENST00000580127 ABCG4Q9H172 646 aa18.36■□□□□ 0.53
MKS1-209ENST00000580127 PCDHGC3Q9UN70 934 aa18.36■□□□□ 0.53
MKS1-209ENST00000580127 NYNRINQ9P2P1 1898 aaKnown RBP18.35■□□□□ 0.53
MKS1-209ENST00000580127 CAPN8A6NHC0 703 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 M0QYT0 321 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 SIGLEC6O43699 453 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 PAGE1O75459 146 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 PCDH8O95206 1070 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 ITPKBP27987 946 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 CHRNA3P32297 505 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 NUMBP49757 651 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 BPIFB4P59827 614 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 PITX1P78337 314 aaPredicted RBP18.35■□□□□ 0.53
MKS1-209ENST00000580127 SLC6A3Q01959 620 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 KCNMA1Q12791 1236 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 PROX2Q3B8N5 592 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 POM121L1PQ3SYA9 428 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 KANSL1Q7Z3B3 1105 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 SETD3Q86TU7 594 aaPredicted RBP18.35■□□□□ 0.53
MKS1-209ENST00000580127 HORMAD1Q86X24 394 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 C1orf131Q8NDD1 294 aaKnown RBP18.35■□□□□ 0.53
MKS1-209ENST00000580127 SNIP1Q8TAD8 396 aaKnown RBP18.35■□□□□ 0.53
MKS1-209ENST00000580127 SLC39A7Q92504 469 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 IFT43Q96FT9 208 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 BBC3Q96PG8 261 aaPredicted RBP18.35■□□□□ 0.53
MKS1-209ENST00000580127 CPXM1Q96SM3 734 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 CRACR2AQ9BSW2 395 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 PDCL3Q9H2J4 239 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 STAP1Q9ULZ2 295 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 HS3ST2Q9Y278 367 aa18.35■□□□□ 0.53
MKS1-209ENST00000580127 DOCK9Q9BZ29 2069 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 A0A1W2PQU0 124 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 BIN1O00499 593 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms