RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 MT-CO1P00395 513 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 TBC1D3HP0C7X1 549 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 FAM228BP0C875 321 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 VAV1P15498 845 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 C5AR1P21730 350 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 MAOBP27338 520 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 L1CAMP32004 1257 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 MAPK8P45983 427 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 MAPKAPK2P49137 400 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 COPAP53621 1224 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 AIF1P55008 147 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 ADKP55263 362 aaKnown RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 GSCP56915 257 aaPredicted RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 GEMIN4P57678 1058 aaKnown RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 TPI1P60174 286 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 IRX4P78413 519 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 PIGHQ14442 188 aaPredicted RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 ELAVL3Q14576 367 aaKnown RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 PUM1Q14671 1186 aaKnown RBP eCLIP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 ARID5BQ14865 1188 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 POLD3Q15054 466 aaPredicted RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 DUOXA1Q1HG43 343 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 UAP1L1Q3KQV9 507 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 C5orf22Q49AR2 442 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 TRIM61Q5EBN2 209 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 PPP1R15BQ5SWA1 713 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 ZFYVE27Q5T4F4 411 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 ERMARDQ5T6L9 678 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 FAM72AQ5TYM5 149 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 E4F1Q66K89 784 aaPredicted RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 TBC1D3GQ6DHY5 549 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 TBC1D3CQ6IPX1 549 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 PLEKHA7Q6IQ23 1121 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 FAM72DQ6L9T8 149 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 ZNF783Q6ZMS7 281 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 Q6ZVU0 165 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 DGLUCYQ7Z3D6 616 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 FAM72BQ86X60 149 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 VSTM4Q8IW00 320 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 TBC1D3Q8IZP1 549 aaPredicted RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 PYROXD2Q8N2H3 581 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 PAF1Q8N7H5 531 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 CADM4Q8NFZ8 388 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 OR7D4Q8NG98 312 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 OR52K2Q8NGK3 314 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 OR14C36Q8NHC7 312 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 NETO1Q8TDF5 533 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 CTNNBL1Q8WYA6 563 aaPredicted RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 NTAN1Q96AB6 310 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 RMDN1Q96DB5 314 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 ZNF419Q96HQ0 510 aaPredicted RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 SYT11Q9BT88 431 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 ANP32EQ9BTT0 268 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 MAGEB5Q9BZ81 275 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 THAP2Q9H0W7 228 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 ISCUQ9H1K1 167 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 RSPH9Q9H1X1 276 aaPredicted RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 MAGEH1Q9H213 219 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 TNKS2Q9H2K2 1166 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 PABPC3Q9H361 631 aaKnown RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 RETREG1Q9H6L5 497 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 SGK2Q9HBY8 427 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 CD248Q9HCU0 757 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 CD93Q9NPY3 652 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 DYRK4Q9NR20 520 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 TMEM74BQ9NUR3 256 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 WSB2Q9NYS7 404 aaPredicted RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 USP36Q9P275 1121 aaKnown RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 CTTNBP2NLQ9P2B4 639 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 SUSD2Q9UGT4 822 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 IP6K2Q9UHH9 426 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 VPS51Q9UID3 782 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 FZD10Q9ULW2 581 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 SLC6A14Q9UN76 642 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 MYOFQ9NZM1 2061 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 ITIH6Q6UXX5 1313 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 ATXN2Q99700 1313 aaKnown RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 SPTBN2O15020 2390 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 MYO16Q9Y6X6 1858 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 DMXL1Q9Y485 3027 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 A0A1W2PP55 124 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 DCDC2BA2VCK2 349 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 C4orf47A7E2U8 309 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 METTL12A8MUP2 240 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 PATE3B3GLJ2 98 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 C1QTNF3-AMACRE9PGA6 284 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 K7ERQ8 282 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 KPNA3O00505 521 aaPredicted RBP6.7□□□□□ -1.34
TRAF4-213ENST00000578917 MCF2LO15068 1137 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 MID1O15344 667 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 FGF10O15520 208 aaPredicted RBP6.7□□□□□ -1.34
TRAF4-213ENST00000578917 ATP9BO43861 1147 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 SYPP08247 313 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 SERPINF2P08697 491 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 GOT1P17174 413 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 TGM1P22735 817 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 MIPP30301 263 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 ACSL1P33121 698 aa6.7□□□□□ -1.34
TRAF4-213ENST00000578917 HOXD12P35452 270 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms