RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 DNAJC28Q9NX36 388 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 NCKIPSDQ9NZQ3 722 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 SERTAD1Q9UHV2 236 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 TRAF3IP3Q9Y228 551 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 ENTPD2Q9Y5L3 495 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 U3KQA8 63 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.38□□□□□ -0.91
PTPRM-210ENST00000578916 CDRT15L2A8MXV6 281 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 O00370 1275 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 STX10O60499 249 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 NEBLO76041 1014 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 GJB6O95452 261 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 APOEP02649 317 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 PDGFRAP16234 1089 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 HNRNPA2B1P22626 353 aaKnown RBP9.38□□□□□ -0.91
PTPRM-210ENST00000578916 MLLT3P42568 568 aaPredicted RBP9.38□□□□□ -0.91
PTPRM-210ENST00000578916 MXI1P50539 228 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 YWHAEP62258 255 aaKnown RBP9.38□□□□□ -0.91
PTPRM-210ENST00000578916 NFKB2Q00653 900 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 CCDC15Q0P6D6 951 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 ZNF177Q13360 481 aaPredicted RBP9.38□□□□□ -0.91
PTPRM-210ENST00000578916 ADAM9Q13443 819 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 NFIL3Q16649 462 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 CDKN3Q16667 212 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 LINC00303Q3SY05 128 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 RAP1GAP2Q684P5 730 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 ZCCHC8Q6NZY4 707 aaKnown RBP9.38□□□□□ -0.91
PTPRM-210ENST00000578916 NEK5Q6P3R8 708 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 CLEC14AQ86T13 490 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 CHSY1Q86X52 802 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 DCP2Q8IU60 420 aaKnown RBP9.38□□□□□ -0.91
PTPRM-210ENST00000578916 WDR36Q8NI36 951 aaKnown RBP9.38□□□□□ -0.91
PTPRM-210ENST00000578916 DQX1Q8TE96 717 aaKnown RBP9.38□□□□□ -0.91
PTPRM-210ENST00000578916 CLEC4CQ8WTT0 213 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 FRS2Q8WU20 508 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 ERCC4Q92889 916 aaPredicted RBP9.38□□□□□ -0.91
PTPRM-210ENST00000578916 PAGE5Q96GU1 130 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 PRR11Q96HE9 360 aaPredicted RBP9.38□□□□□ -0.91
PTPRM-210ENST00000578916 MIS12Q9H081 205 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 CAAP1Q9H8G2 361 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 STARD5Q9NSY2 213 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 SLC25A13Q9UJS0 675 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 KIAA1257Q9ULG3 409 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 PPM1HQ9ULR3 514 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 TLR6Q9Y2C9 796 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 COL12A1Q99715 3063 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 PIEZO2Q9H5I5 2752 aa9.38□□□□□ -0.91
PTPRM-210ENST00000578916 ARID1BQ8NFD5 2236 aaPredicted RBP9.37□□□□□ -0.91
PTPRM-210ENST00000578916 PMS2P1A4D2B8 440 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 A6NNZ2 444 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 F5H5T6 163 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 H3BM21 787 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 MCF2LO15068 1137 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 ALOX15BO15296 676 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 EFSO43281 561 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 SUV39H1O43463 412 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 ATP9BO43861 1147 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 BNIP3LO60238 219 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 TCEA3O75764 348 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 FBXO21O94952 628 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 SFTPCP11686 197 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 TACR2P21452 398 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 ME1P48163 572 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 INHBCP55103 352 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 OXCT1P55809 520 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 CLDN2P57739 230 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 TAS2R38P59533 333 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 NNTQ13423 1086 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 CUL2Q13617 745 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 GSE1Q14687 1217 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 NR0B2Q15466 257 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 DLG2Q15700 870 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 ZNF284Q2VY69 593 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 RESP18Q5W5W9 173 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 PMF1Q6P1K2 205 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 GUSBP11Q6P575 273 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 CRTC1Q6UUV9 634 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 LCLAT1Q6UWP7 414 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 GCNT7Q6ZNI0 430 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 Q6ZSR6 202 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 Q6ZVU0 165 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 PTAR1Q7Z6K3 402 aaPredicted RBP9.37□□□□□ -0.91
PTPRM-210ENST00000578916 ABI3BPQ7Z7G0 1075 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 HORMAD1Q86X24 394 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 CCAR2Q8N163 923 aaKnown RBP9.37□□□□□ -0.91
PTPRM-210ENST00000578916 SLC22A18ASQ8N1D0 253 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 ZNF548Q8NEK5 533 aaPredicted RBP9.37□□□□□ -0.91
PTPRM-210ENST00000578916 FAM174AQ8TBP5 190 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 SLC35F5Q8WV83 523 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 EXTL1Q92935 676 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 RNF34Q969K3 372 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 CCDC47Q96A33 483 aaKnown RBP9.37□□□□□ -0.91
PTPRM-210ENST00000578916 SGF29Q96ES7 293 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 EEF2KMTQ96G04 330 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 SLC39A13Q96H72 371 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 NOX5Q96PH1 765 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 PPP1R9BQ96SB3 815 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 DYRK4Q9NR20 520 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 PLSCR2Q9NRY7 297 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 ANKMY1Q9P2S6 941 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms