RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 DMC1Q14565 340 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 DNTTIP2Q5QJE6 756 aaKnown RBP12.41□□□□□ -0.42
IFT20-207ENST00000578547 TMEM215Q68D42 235 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 FSTL4Q6MZW2 842 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 LINGO4Q6UY18 593 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 NUDT18Q6ZVK8 323 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 ADIPOR2Q86V24 386 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 ZC3H18Q86VM9 953 aaKnown RBP12.41□□□□□ -0.42
IFT20-207ENST00000578547 RASGEF1CQ8N431 466 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 DCAF4L2Q8NA75 395 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 ACTL9Q8TC94 416 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 CYB5D2Q8WUJ1 264 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 MAIP1Q8WWC4 291 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 ATG4AQ8WYN0 398 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 ALG14Q96F25 216 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 SHDQ96IW2 340 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 NAP1L3Q99457 506 aaPredicted RBP12.41□□□□□ -0.42
IFT20-207ENST00000578547 AP1M1Q9BXS5 423 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 EPHX3Q9H6B9 360 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 NYNRINQ9P2P1 1898 aaKnown RBP12.41□□□□□ -0.42
IFT20-207ENST00000578547 VPS51Q9UID3 782 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 MTF2Q9Y483 593 aaPredicted RBP12.41□□□□□ -0.42
IFT20-207ENST00000578547 OR51B4Q9Y5P0 310 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 PRRT4C9JH25 899 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 H7C0C1 242 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 J3KR12 359 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 STK25O00506 426 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 PPP1R12AO14974 1030 aaPredicted RBP12.4□□□□□ -0.42
IFT20-207ENST00000578547 MCF2LO15068 1137 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 KDELR3O43731 214 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 PDGFBP01127 241 aaPredicted RBP12.4□□□□□ -0.42
IFT20-207ENST00000578547 GARSP41250 739 aaKnown RBP12.4□□□□□ -0.42
IFT20-207ENST00000578547 ATP5OP48047 213 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 NR2C2P49116 596 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 STK19P49842 368 aaPredicted RBP12.4□□□□□ -0.42
IFT20-207ENST00000578547 PLK1P53350 603 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 AP1B1Q10567 949 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 SNX1Q13596 522 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 UBXN2BQ14CS0 331 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 PDK1Q15118 436 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 NOMO1Q15155 1222 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 TMEM196Q5HYL7 178 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 BZW1Q7L1Q6 419 aaKnown RBP12.4□□□□□ -0.42
IFT20-207ENST00000578547 KIAA0907Q7Z7F0 614 aaPredicted RBP12.4□□□□□ -0.42
IFT20-207ENST00000578547 SUGP1Q8IWZ8 645 aaKnown RBP12.4□□□□□ -0.42
IFT20-207ENST00000578547 ZNF687Q8N1G0 1237 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 TTC13Q8NBP0 860 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 ACTRT1Q8TDG2 376 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 C1orf54Q8WWF1 131 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 EZH1Q92800 747 aaPredicted RBP12.4□□□□□ -0.42
IFT20-207ENST00000578547 RPL10LQ96L21 214 aaKnown RBP12.4□□□□□ -0.42
IFT20-207ENST00000578547 OLFM3Q96PB7 478 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 LGMNQ99538 433 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 ACE2Q9BYF1 805 aaPredicted RBP12.4□□□□□ -0.42
IFT20-207ENST00000578547 FOXQ1Q9C009 403 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 TBC1D17Q9HA65 648 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 ZDHHC4Q9NPG8 344 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 IPO11Q9UI26 975 aaKnown RBP12.4□□□□□ -0.42
IFT20-207ENST00000578547 SLC25A13Q9UJS0 675 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 ACTL7AQ9Y615 435 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 RAD54BQ9Y620 910 aa12.4□□□□□ -0.42
IFT20-207ENST00000578547 TECTAO75443 2155 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 A0A0A0MRY4 1105 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 GOLGA6L10A0A0M3HER8 536 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 KANSL1LA0AUZ9 987 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 ANTXRLA6NF34 631 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 TMEM221A6NGB7 291 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 FAM170BA6NMN3 283 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 M0R296 226 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 KRIT1O00522 736 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 NCAM2O15394 837 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 MAFKO60675 156 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 ATP5BP06576 529 aaKnown RBP12.39□□□□□ -0.43
IFT20-207ENST00000578547 DRD1P21728 446 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 PAFAH1B1P43034 410 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 ARF5P84085 180 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 ECT2LQ008S8 904 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 EIF4HQ15056 248 aaKnown RBP12.39□□□□□ -0.43
IFT20-207ENST00000578547 SIX1Q15475 284 aaPredicted RBP12.39□□□□□ -0.43
IFT20-207ENST00000578547 FNDC3BQ53EP0 1204 aaKnown RBP12.39□□□□□ -0.43
IFT20-207ENST00000578547 CREG2Q8IUH2 290 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 UCMAQ8WVF2 138 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 TFB1MQ8WVM0 346 aaKnown RBP12.39□□□□□ -0.43
IFT20-207ENST00000578547 HDAC11Q96DB2 347 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 C10orf88Q9H8K7 445 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 LTB4R2Q9NPC1 389 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 RBM12Q9NTZ6 932 aaKnown RBP12.39□□□□□ -0.43
IFT20-207ENST00000578547 ELOVL2Q9NXB9 296 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 SEPT10Q9P0V9 454 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 TTC7AQ9ULT0 858 aaPredicted RBP12.39□□□□□ -0.43
IFT20-207ENST00000578547 ERVW-1Q9UQF0 538 aa12.39□□□□□ -0.43
IFT20-207ENST00000578547 MRPS17Q9Y2R5 130 aaKnown RBP12.39□□□□□ -0.43
IFT20-207ENST00000578547 K7EQS6 105 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 KCNK1O00180 336 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 LIASO43766 372 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 PRAMEF11O60813 436 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 ZMPSTE24O75844 475 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 ASLP04424 464 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 DLDP09622 509 aaKnown RBP12.38□□□□□ -0.43
IFT20-207ENST00000578547 RBP3P10745 1247 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms