RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 CEBPBP17676 345 aa18.95■□□□□ 0.62
PRKCA-203ENST00000578063 MAGEA4P43358 317 aa18.95■□□□□ 0.62
PRKCA-203ENST00000578063 SARNPP82979 210 aaKnown RBP18.95■□□□□ 0.62
PRKCA-203ENST00000578063 CBLBQ13191 982 aa18.95■□□□□ 0.62
PRKCA-203ENST00000578063 HNRNPDQ14103 355 aaKnown RBP18.95■□□□□ 0.62
PRKCA-203ENST00000578063 FAM182AQ5T1J6 154 aa18.95■□□□□ 0.62
PRKCA-203ENST00000578063 LRIG3Q6UXM1 1119 aa18.95■□□□□ 0.62
PRKCA-203ENST00000578063 TMEM184AQ6ZMB5 413 aa18.95■□□□□ 0.62
PRKCA-203ENST00000578063 TDRD5Q8NAT2 981 aaKnown RBP18.95■□□□□ 0.62
PRKCA-203ENST00000578063 ARHGEF2Q92974 986 aaKnown RBP18.95■□□□□ 0.62
PRKCA-203ENST00000578063 TTC25Q96NG3 672 aa18.95■□□□□ 0.62
PRKCA-203ENST00000578063 ZIM3Q96PE6 472 aa18.95■□□□□ 0.62
PRKCA-203ENST00000578063 PPP1R2P1Q96PQ5 205 aa18.95■□□□□ 0.62
PRKCA-203ENST00000578063 EPB41L4BQ9H329 900 aa18.95■□□□□ 0.62
PRKCA-203ENST00000578063 CCL26Q9Y258 94 aa18.95■□□□□ 0.62
PRKCA-203ENST00000578063 PLAAQ9Y263 795 aa18.95■□□□□ 0.62
PRKCA-203ENST00000578063 ERI2A8K979 691 aaKnown RBP18.94■□□□□ 0.62
PRKCA-203ENST00000578063 TBL1XO60907 577 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 NUDT17P0C025 328 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 CD68P34810 354 aaPredicted RBP18.94■□□□□ 0.62
PRKCA-203ENST00000578063 RENBPP51606 427 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 GAD2Q05329 585 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 PDIA2Q13087 525 aaKnown RBP18.94■□□□□ 0.62
PRKCA-203ENST00000578063 MPPE1Q53F39 396 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 MPP7Q5T2T1 576 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 SERPINB12Q96P63 405 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 XAB2Q9HCS7 855 aaKnown RBP18.94■□□□□ 0.62
PRKCA-203ENST00000578063 HELZP42694 1942 aaKnown RBP18.94■□□□□ 0.62
PRKCA-203ENST00000578063 GOLGA6CA6NDK9 693 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 ALOX15BO15296 676 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 CACNG3O60359 315 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 PRAMEF11O60813 436 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 LUC7L3O95232 432 aaKnown RBP18.94■□□□□ 0.62
PRKCA-203ENST00000578063 TTC4O95801 387 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 PEX11BO96011 259 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 GOLGA6DP0CG33 693 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 NFKB1P19838 968 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 ACVRL1P37023 503 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 IFNAR2P48551 515 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 USP4Q13107 963 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 PRPSAP1Q14558 356 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 EFHBQ8N7U6 833 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 CNTD1Q8N815 330 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 USP33Q8TEY7 942 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 ZNF599Q96NL3 588 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 PRO3102Q9H379 93 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 IGFLR1Q9H665 355 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 KIF9Q9HAQ2 790 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 RBM22Q9NW64 420 aaKnown RBP eCLIP18.94■□□□□ 0.623e-6■■■■□ 24.6
PRKCA-203ENST00000578063 GOLGA6AQ9NYA3 693 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 NINJ2Q9NZG7 142 aa18.94■□□□□ 0.62
PRKCA-203ENST00000578063 NYNRINQ9P2P1 1898 aaKnown RBP18.93■□□□□ 0.62
PRKCA-203ENST00000578063 H0Y626 953 aa18.93■□□□□ 0.62
PRKCA-203ENST00000578063 J3KR12 359 aa18.93■□□□□ 0.62
PRKCA-203ENST00000578063 PRAMEF12O95522 483 aa18.93■□□□□ 0.62
PRKCA-203ENST00000578063 WEE1P30291 646 aa18.93■□□□□ 0.62
PRKCA-203ENST00000578063 EIF3BP55884 814 aaKnown RBP18.93■□□□□ 0.62
PRKCA-203ENST00000578063 FAM193AP78312 1265 aa18.93■□□□□ 0.62
PRKCA-203ENST00000578063 TNK2Q07912 1038 aa18.93■□□□□ 0.62
PRKCA-203ENST00000578063 ZNF77Q15935 545 aa18.93■□□□□ 0.62
PRKCA-203ENST00000578063 DNAJC21Q5F1R6 531 aaKnown RBP18.93■□□□□ 0.62
PRKCA-203ENST00000578063 FNBP1LQ5T0N5 605 aa18.93■□□□□ 0.62
PRKCA-203ENST00000578063 SYCP2LQ5T4T6 812 aa18.93■□□□□ 0.62
PRKCA-203ENST00000578063 MARC1Q5VT66 337 aa18.93■□□□□ 0.62
PRKCA-203ENST00000578063 CXorf57Q6NSI4 855 aaKnown RBP18.93■□□□□ 0.62
PRKCA-203ENST00000578063 ZBED8Q8IZ13 594 aa18.93■□□□□ 0.62
PRKCA-203ENST00000578063 PDCD7Q8N8D1 485 aaKnown RBP18.93■□□□□ 0.62
PRKCA-203ENST00000578063 ITFG1Q8TB96 612 aa18.93■□□□□ 0.62
PRKCA-203ENST00000578063 ING5Q8WYH8 240 aa18.93■□□□□ 0.62
PRKCA-203ENST00000578063 PABPC5Q96DU9 382 aaKnown RBP18.93■□□□□ 0.62
PRKCA-203ENST00000578063 FAM53CQ9NYF3 392 aa18.93■□□□□ 0.62
PRKCA-203ENST00000578063 TRANK1O15050 2925 aa18.93■□□□□ 0.62
PRKCA-203ENST00000578063 NUP205Q92621 2012 aa18.93■□□□□ 0.62
PRKCA-203ENST00000578063 NOTCH4Q99466 2003 aa18.93■□□□□ 0.62
PRKCA-203ENST00000578063 A0A0D9SEW6 157 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 F5H423 210 aaPredicted RBP18.92■□□□□ 0.62
PRKCA-203ENST00000578063 AP2A1O95782 977 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 CYBBP04839 570 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 MLNP12872 115 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 HOXD9P28356 352 aaPredicted RBP18.92■□□□□ 0.62
PRKCA-203ENST00000578063 HYAL1Q12794 435 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 CDH18Q13634 790 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 SLC29A2Q14542 456 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 HSP90B2PQ58FF3 399 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 TCEAL5Q5H9L2 206 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 RARS2Q5T160 578 aaKnown RBP18.92■□□□□ 0.62
PRKCA-203ENST00000578063 TMCO4Q5TGY1 634 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 IL31Q6EBC2 164 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 CCDC117Q8IWD4 279 aaPredicted RBP18.92■□□□□ 0.62
PRKCA-203ENST00000578063 KLHDC8BQ8IXV7 354 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 CARNMT1Q8N4J0 409 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 TEX26Q8N6G2 289 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 KIAA1958Q8N8K9 716 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 OR52K2Q8NGK3 314 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 DDI1Q8WTU0 396 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 PKNOX2Q96KN3 472 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 C9orf72Q96LT7 481 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 FCRL5Q96RD9 977 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 ZNF576Q9H609 170 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 PDFQ9HBH1 243 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms