RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 NAA15Q9BXJ9 866 aaKnown RBP17.09■□□□□ 0.33
CDK5RAP3-206ENST00000578018 TKTL2Q9H0I9 626 aa17.09■□□□□ 0.33
CDK5RAP3-206ENST00000578018 SIK2Q9H0K1 926 aa17.09■□□□□ 0.33
CDK5RAP3-206ENST00000578018 DACH1Q9UI36 760 aa17.09■□□□□ 0.33
CDK5RAP3-206ENST00000578018 PPM1HQ9ULR3 514 aa17.09■□□□□ 0.33
CDK5RAP3-206ENST00000578018 HS3ST2Q9Y278 367 aa17.09■□□□□ 0.33
CDK5RAP3-206ENST00000578018 TBC1D3DA0A087WVF3 549 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 TBC1D3IA0A087WXS9 549 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 TBC1D3EA0A087X179 549 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 TBC1D3KA0A087X1G2 549 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 TBC1D3FA6NER0 549 aaPredicted RBP17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 GOLGA8CPA6NN73 597 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 TBC1D3LB9A6J9 549 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 MCF2LO15068 1137 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 PLRG1O43660 514 aaKnown RBP17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 TBC1D3HP0C7X1 549 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 SHBQ15464 509 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 DLG2Q15700 870 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 ACCSLQ4AC99 568 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 PRAMEF14Q5SWL7 426 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 FAM102AQ5T9C2 384 aaPredicted RBP17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 AGBL4Q5VU57 503 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 TAF3Q5VWG9 929 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 FAM46CQ5VWP2 391 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 TBC1D3GQ6DHY5 549 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 TBC1D3CQ6IPX1 549 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 NAPEPLDQ6IQ20 393 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 XYLT1Q86Y38 959 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 TBC1D3Q8IZP1 549 aaPredicted RBP17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 C18orf8Q96DM3 657 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 TBCBQ99426 244 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 PSMB7Q99436 277 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 MUC3BQ9H195 1237 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 NUP62CLQ9H1M0 184 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 PDCL3Q9H2J4 239 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 WDCPQ9H6R7 721 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 GDF3Q9NR23 364 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 LMBRD1Q9NUN5 540 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 SNX10Q9Y5X0 201 aa17.08■□□□□ 0.32
CDK5RAP3-206ENST00000578018 FAM170AA1A519 330 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 C1QTNF3-AMACRE9PGA6 284 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 F8VZ95 297 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 LSM8O95777 96 aaKnown RBP17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 RHOCP08134 193 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 SRCP12931 536 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 UCHL3P15374 230 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 FLT3P36888 993 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 DEUP1Q05D60 604 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 CNTN1Q12860 1018 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 SLC25A52Q3SY17 297 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 POM121L1PQ3SYA9 428 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 TRNP1Q6NT89 227 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 NOP9Q86U38 636 aaKnown RBP17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 GATAD2AQ86YP4 633 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 PIP4K2CQ8TBX8 421 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 EPS8L1Q8TE68 723 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 C2orf49Q9BVC5 232 aaPredicted RBP17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 KDM4CQ9H3R0 1056 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 TMPRSS4Q9NRS4 437 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 SAMSN1Q9NSI8 373 aaKnown RBP17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 ARHGAP20Q9P2F6 1191 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 FTSJ1Q9UET6 329 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 VPS51Q9UID3 782 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 PAXBP1Q9Y5B6 917 aa17.07■□□□□ 0.32
CDK5RAP3-206ENST00000578018 IGLV3-10A0A075B6K4 115 aa17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 PES1O00541 588 aaKnown RBP17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 YKT6O15498 198 aa17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 SNAP91O60641 907 aa17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 MT-CO1P00395 513 aa17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 F9P00740 461 aa17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 EEF1GP26641 437 aaKnown RBP17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 EPHA8P29322 1005 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 NXPH1P58417 271 aa17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 KRT83P78385 493 aa17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 C2CD6Q53TS8 623 aa17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 ARTNQ5T4W7 220 aa17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 BNIPLQ7Z465 357 aa17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 SETD3Q86TU7 594 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 TRIM69Q86WT6 500 aa17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 ERICH1Q86X53 443 aa17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 DCAF4L2Q8NA75 395 aa17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 SAP25Q8TEE9 199 aa17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 CCDC86Q9H6F5 360 aaKnown RBP17.06■□□□□ 0.32
CDK5RAP3-206ENST00000578018 NBEAQ8NFP9 2946 aa17.05■□□□□ 0.32
CDK5RAP3-206ENST00000578018 DRGXA6NNA5 263 aa17.05■□□□□ 0.32
CDK5RAP3-206ENST00000578018 GOLGA6L22H0YM25 854 aa17.05■□□□□ 0.32
CDK5RAP3-206ENST00000578018 TLR4O00206 839 aa17.05■□□□□ 0.32
CDK5RAP3-206ENST00000578018 BNIP3LO60238 219 aa17.05■□□□□ 0.32
CDK5RAP3-206ENST00000578018 CTSLP07711 333 aa17.05■□□□□ 0.32
CDK5RAP3-206ENST00000578018 MAT2AP31153 395 aaKnown RBP17.05■□□□□ 0.32
CDK5RAP3-206ENST00000578018 NUDT1P36639 197 aa17.05■□□□□ 0.32
CDK5RAP3-206ENST00000578018 NOMO3P69849 1222 aa17.05■□□□□ 0.32
CDK5RAP3-206ENST00000578018 SMAD1Q15797 465 aaKnown RBP17.05■□□□□ 0.32
CDK5RAP3-206ENST00000578018 SLC45A4Q5BKX6 768 aa17.05■□□□□ 0.32
CDK5RAP3-206ENST00000578018 TCP11X2Q5H9J9 407 aa17.05■□□□□ 0.32
CDK5RAP3-206ENST00000578018 TFAP2DQ7Z6R9 452 aa17.05■□□□□ 0.32
CDK5RAP3-206ENST00000578018 PRPF39Q86UA1 669 aaKnown RBP17.05■□□□□ 0.32
CDK5RAP3-206ENST00000578018 MARCH9Q86YJ5 346 aa17.05■□□□□ 0.32
CDK5RAP3-206ENST00000578018 GALNT15Q8N3T1 639 aa17.05■□□□□ 0.32
CDK5RAP3-206ENST00000578018 MFSD2AQ8NA29 543 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms