RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 EPC1Q9H2F5 836 aa14.22□□□□□ -0.13
SNORD3B-1-201ENST00000577988 PRDM16Q9HAZ2 1276 aa14.22□□□□□ -0.13
SNORD3B-1-201ENST00000577988 CWC15Q9P013 229 aaKnown RBP14.22□□□□□ -0.13
SNORD3B-1-201ENST00000577988 VPS51Q9UID3 782 aa14.22□□□□□ -0.13
SNORD3B-1-201ENST00000577988 SCML1Q9UN30 329 aa14.22□□□□□ -0.13
SNORD3B-1-201ENST00000577988 RAD54BQ9Y620 910 aa14.22□□□□□ -0.13
SNORD3B-1-201ENST00000577988 R4GN57 208 aa14.22□□□□□ -0.13
SNORD3B-1-201ENST00000577988 MUC22E2RYF6 1773 aaPredicted RBP14.22□□□□□ -0.13
SNORD3B-1-201ENST00000577988 ABCA7Q8IZY2 2146 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 ARHGAP42A6NI28 874 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 ZNF487B1APH4 448 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 CBX4O00257 560 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 HRO43593 1189 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 KDELR3O43731 214 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 RPP40O75818 363 aaKnown RBP14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 HLA-EP13747 358 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 GOT1P17174 413 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 ERCC2P18074 760 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 P2RY2P41231 377 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 PXNP49023 591 aaPredicted RBP14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 DPYSQ14117 519 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 SIM2Q14190 667 aaPredicted RBP14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 KRT81Q14533 505 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 DLG2Q15700 870 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 IFI16Q16666 785 aaKnown RBP14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 SMTNL2Q2TAL5 461 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 C9orf64Q5T6V5 341 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 SLC36A4Q6YBV0 504 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 KIAA1328Q86T90 577 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 PLPP6Q8IY26 295 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 FRS2Q8WU20 508 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 UBE2Q2Q8WVN8 375 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 PTPRN2Q92932 1015 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 ISG20Q96AZ6 181 aaKnown RBP14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 SIPA1Q96FS4 1042 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 SPACA7Q96KW9 195 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 CCDC114Q96M63 670 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 CEP44Q9C0F1 390 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 RSPH9Q9H1X1 276 aaPredicted RBP14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 PCDH18Q9HCL0 1135 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 ITM2CQ9NQX7 267 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.21□□□□□ -0.133e-11■■■■■ 35.5
SNORD3B-1-201ENST00000577988 NDFIP2Q9NV92 336 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 RAB23Q9ULC3 237 aa14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 FARP1Q9Y4F1 1045 aaPredicted RBP14.21□□□□□ -0.13
SNORD3B-1-201ENST00000577988 SDK1Q7Z5N4 2213 aa14.21□□□□□ -0.14
SNORD3B-1-201ENST00000577988 TMEM110-MUSTN1A8MSY1 372 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 TTC34A8MYJ7 566 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 RASA4BC9J798 803 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ALOX15BO15296 676 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ARHGAP6O43182 974 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 RASA4O43374 803 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 SNAP91O60641 907 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 LMNAP02545 664 aaKnown RBP14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 SRCP12931 536 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 TCF4P15884 667 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 NDUFV2P19404 249 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 OXTRP30559 389 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ARSEP51690 589 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 COPAP53621 1224 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 CDH6P55285 790 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 KIF5AQ12840 1032 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 SERINC3Q13530 473 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ELAVL3Q14576 367 aaKnown RBP14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ACCSLQ4AC99 568 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 INO80DQ53TQ3 878 aaPredicted RBP14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 SPDYCQ5MJ68 293 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 DAB2IPQ5VWQ8 1189 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ZNF776Q68DI1 518 aaPredicted RBP14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 TXNRD3NBQ6F5E7 133 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 CEP68Q76N32 757 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 DSG4Q86SJ6 1040 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 LRRC49Q8IUZ0 686 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 LRRC8AQ8IWT6 810 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ATP11CQ8NB49 1132 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 KCTD6Q8NC69 237 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 TSC1Q92574 1164 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 FAM122AQ96E09 287 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 LOXL4Q96JB6 756 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ZC3H10Q96K80 434 aaKnown RBP14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 CSPG4P5Q96PW8 444 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ZNF670Q9BS34 389 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 MKRN2Q9H000 416 aaKnown RBP14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 NOL6Q9H6R4 1146 aaKnown RBP14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 LRRC19Q9H756 370 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 FAM86C1Q9NVL1 165 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 DDX56Q9NY93 547 aaKnown RBP14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 REXO2Q9Y3B8 237 aaKnown RBP14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 THADAQ6YHU6 1953 aa14.2□□□□□ -0.14
SNORD3B-1-201ENST00000577988 DCLK1O15075 740 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 BUB1BO60566 1050 aaPredicted RBP14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 SIN3BO75182 1162 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 RHOBTB1O94844 696 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 IGLV3-19P01714 112 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ACADMP11310 421 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 SERPINB6P35237 376 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ACVRL1P37023 503 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 STK19P49842 368 aaPredicted RBP14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 SERPINH1P50454 418 aaKnown RBP14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 TAS2R40P59535 323 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms