RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 RFWD3Q6PCD5 774 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 DARS2Q6PI48 645 aaKnown RBP10.34□□□□□ -0.75
CRLF3-202ENST00000577725 MAMSTRQ6ZN01 415 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 PDZD4Q76G19 769 aaPredicted RBP10.34□□□□□ -0.75
CRLF3-202ENST00000577725 VSIG1Q86XK7 387 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 DENND1CQ8IV53 801 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 LGI2Q8N0V4 545 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 TAB3Q8N5C8 712 aaPredicted RBP10.34□□□□□ -0.75
CRLF3-202ENST00000577725 NPWQ8N729 165 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 GLIS1Q8NBF1 620 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 SLC35B2Q8TB61 432 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 DEPDC1BQ8WUY9 529 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 SMG7Q92540 1137 aaKnown RBP10.34□□□□□ -0.75
CRLF3-202ENST00000577725 P3H4Q92791 437 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 CELF6Q96J87 481 aaKnown RBP10.34□□□□□ -0.75
CRLF3-202ENST00000577725 ZFRQ96KR1 1074 aaKnown RBP10.34□□□□□ -0.75
CRLF3-202ENST00000577725 TMEM121Q9BTD3 319 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 EPB41L5Q9HCM4 733 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 STIM2Q9P246 746 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 RCOR3Q9P2K3 495 aaPredicted RBP10.34□□□□□ -0.75
CRLF3-202ENST00000577725 PCYOX1Q9UHG3 505 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 SLC12A6Q9UHW9 1150 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 ZNF148Q9UQR1 794 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 SNX24Q9Y343 169 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 CNOT1A5YKK6 2376 aaKnown RBP10.34□□□□□ -0.75
CRLF3-202ENST00000577725 DOCK4Q8N1I0 1966 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 HELZP42694 1942 aaKnown RBP10.33□□□□□ -0.76
CRLF3-202ENST00000577725 TRAV19A0A0A6YYK7 116 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 SGK1O00141 431 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 HRO43593 1189 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 ACSL4O60488 711 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 TSPAN3O60637 253 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 XYLBO75191 536 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 CNTN5O94779 1100 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 ECEL1O95672 775 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 KRT14P02533 472 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 KLKB1P03952 638 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 CKMP06732 381 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 HNRNPA1P09651 372 aaKnown RBP eCLIP10.33□□□□□ -0.76
CRLF3-202ENST00000577725 MYBL2P10244 700 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 RBP3P10745 1247 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 ZFXP17010 805 aaPredicted RBP10.33□□□□□ -0.76
CRLF3-202ENST00000577725 PTPN2P17706 415 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 SLC6A4P31645 630 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 MLLT3P42568 568 aaPredicted RBP10.33□□□□□ -0.76
CRLF3-202ENST00000577725 CARSP49589 748 aaKnown RBP10.33□□□□□ -0.76
CRLF3-202ENST00000577725 NUMBP49757 651 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 SGSHP51688 502 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 GDF10P55107 478 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 MLLT6P55198 1093 aaPredicted RBP10.33□□□□□ -0.76
CRLF3-202ENST00000577725 ZXDBP98169 803 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 AUHQ13825 339 aaKnown RBP10.33□□□□□ -0.76
CRLF3-202ENST00000577725 DHX34Q14147 1143 aaKnown RBP10.33□□□□□ -0.76
CRLF3-202ENST00000577725 PABPC1LQ4VXU2 614 aaKnown RBP10.33□□□□□ -0.76
CRLF3-202ENST00000577725 GLE1Q53GS7 698 aaKnown RBP10.33□□□□□ -0.76
CRLF3-202ENST00000577725 ALFQ53S48 1182 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 NUGGCQ68CJ6 796 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 FBXL22Q6P050 247 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 KLHDC10Q6PID8 442 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 POTEHQ6S545 545 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 GSTA5Q7RTV2 222 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 MAATS1Q7Z4T9 603 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 UNC45BQ8IWX7 931 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 ZNF683Q8IZ20 524 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 ZNF276Q8N554 614 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 FAM160A2Q8N612 972 aaPredicted RBP10.33□□□□□ -0.76
CRLF3-202ENST00000577725 ALLCQ8N6M5 410 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 TTC13Q8NBP0 860 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 ATL2Q8NHH9 583 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 ITFG1Q8TB96 612 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 IFT81Q8WYA0 676 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 IGSF8Q969P0 613 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 PLD4Q96BZ4 506 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 BTN2A3PQ96KV6 586 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 PRMT1Q99873 361 aaKnown RBP10.33□□□□□ -0.76
CRLF3-202ENST00000577725 IER2Q9BTL4 223 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 SLC46A2Q9BY10 475 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 PRKD2Q9BZL6 878 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 PIDD1Q9HB75 910 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 HOMER3Q9NSC5 361 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 DTLQ9NZJ0 730 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 CFAP97Q9P2B7 532 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 MRPS17Q9Y2R5 130 aaKnown RBP10.33□□□□□ -0.76
CRLF3-202ENST00000577725 MSRB2Q9Y3D2 182 aa10.33□□□□□ -0.76
CRLF3-202ENST00000577725 TARSL2A2RTX5 802 aaKnown RBP10.32□□□□□ -0.76
CRLF3-202ENST00000577725 BHMG1C9JSJ3 638 aaPredicted RBP10.32□□□□□ -0.76
CRLF3-202ENST00000577725 DYNC1I1O14576 645 aa10.32□□□□□ -0.76
CRLF3-202ENST00000577725 OLFM2O95897 454 aa10.32□□□□□ -0.76
CRLF3-202ENST00000577725 IFNB1P01574 187 aa10.32□□□□□ -0.76
CRLF3-202ENST00000577725 VAV1P15498 845 aa10.32□□□□□ -0.76
CRLF3-202ENST00000577725 RBL1P28749 1068 aa10.32□□□□□ -0.76
CRLF3-202ENST00000577725 HOXA9P31269 272 aa10.32□□□□□ -0.76
CRLF3-202ENST00000577725 HOXC13P31276 330 aa10.32□□□□□ -0.76
CRLF3-202ENST00000577725 RPL21P46778 160 aaKnown RBP10.32□□□□□ -0.76
CRLF3-202ENST00000577725 HCAR3P49019 387 aa10.32□□□□□ -0.76
CRLF3-202ENST00000577725 CCR3P51677 355 aa10.32□□□□□ -0.76
CRLF3-202ENST00000577725 KPNA1P52294 538 aaPredicted RBP10.32□□□□□ -0.76
CRLF3-202ENST00000577725 EPHA5P54756 1037 aa10.32□□□□□ -0.76
CRLF3-202ENST00000577725 TUBB4BP68371 445 aa10.32□□□□□ -0.76
CRLF3-202ENST00000577725 COG7P83436 770 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms