RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 ST7Q9NRC1 585 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.74□□□□□ -0.21
COPS3-214ENST00000577246 UCKL1Q9NWZ5 548 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 ARMCX3Q9UH62 379 aaPredicted RBP13.74□□□□□ -0.21
COPS3-214ENST00000577246 NAALADL1Q9UQQ1 740 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 TP53BP1Q12888 1972 aaPredicted RBP13.74□□□□□ -0.21
COPS3-214ENST00000577246 CFAP46Q8IYW2 2715 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 KCNU1A8MYU2 1149 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 H3BM21 787 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 SCAMP1O15126 338 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 SLC31A1O15431 190 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 ARHGAP6O43182 974 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 SLC28A2O43868 658 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 GABBR2O75899 941 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 WISP1O95388 367 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 FYNP06241 537 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 METAP1P53582 386 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 FKBP3Q00688 224 aaKnown RBP13.73□□□□□ -0.21
COPS3-214ENST00000577246 LRMPQ12912 555 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 LY6DQ14210 128 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 ZC3H12AQ5D1E8 599 aaKnown RBP13.73□□□□□ -0.21
COPS3-214ENST00000577246 ZCCHC8Q6NZY4 707 aaKnown RBP13.73□□□□□ -0.21
COPS3-214ENST00000577246 HORMAD1Q86X24 394 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 MED15Q96RN5 788 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 POPDC2Q9HBU9 364 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 ASCL3Q9NQ33 180 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 RMND1Q9NWS8 449 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 XPO7Q9UIA9 1087 aaKnown RBP13.73□□□□□ -0.21
COPS3-214ENST00000577246 SARDHQ9UL12 918 aa13.73□□□□□ -0.21
COPS3-214ENST00000577246 A0A1W2PQU0 124 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 A6NNZ2 444 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 K7ENP7 123 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 PRLRP16471 622 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 BRD2P25440 801 aaKnown RBP13.72□□□□□ -0.21
COPS3-214ENST00000577246 MLLT3P42568 568 aaPredicted RBP13.72□□□□□ -0.21
COPS3-214ENST00000577246 NDUFA8P51970 172 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 DLG2Q15700 870 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 ISXQ2M1V0 245 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 INO80CQ6PI98 192 aaPredicted RBP13.72□□□□□ -0.21
COPS3-214ENST00000577246 KRBA2Q6ZNG9 492 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 Q6ZVU0 165 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 PPM1KQ8N3J5 372 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 ARL14Q8N4G2 192 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 OR13H1Q8NG92 308 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 IFI44Q8TCB0 444 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 SPATA32Q96LK8 384 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 MYOCQ99972 504 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 SEMA4CQ9C0C4 833 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 METTL14Q9HCE5 456 aaKnown RBP13.72□□□□□ -0.21
COPS3-214ENST00000577246 DNAJC28Q9NX36 388 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 VPS28Q9UK41 221 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 CA5BQ9Y2D0 317 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 PCDHGA8Q9Y5G5 932 aa13.72□□□□□ -0.21
COPS3-214ENST00000577246 TENM4Q6N022 2769 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.71□□□□□ -0.21
COPS3-214ENST00000577246 FAM237AA0A1B0GTK4 181 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 K7ESM1 405 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 KPNA3O00505 521 aaPredicted RBP13.71□□□□□ -0.21
COPS3-214ENST00000577246 BNIP3LO60238 219 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 TCEA3O75764 348 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 TRUB2O95900 331 aaKnown RBP13.71□□□□□ -0.21
COPS3-214ENST00000577246 PRNPP04156 253 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 CCR1P32246 355 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 RPL34P49207 117 aaKnown RBP13.71□□□□□ -0.21
COPS3-214ENST00000577246 YWHAZP63104 245 aaKnown RBP13.71□□□□□ -0.21
COPS3-214ENST00000577246 KRT83P78385 493 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 ZNF177Q13360 481 aaPredicted RBP13.71□□□□□ -0.21
COPS3-214ENST00000577246 MEA1Q16626 185 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 ZNF284Q2VY69 593 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 C3orf38Q5JPI3 329 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 PIP5KL1Q5T9C9 394 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 SYPL2Q5VXT5 272 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 CXorf57Q6NSI4 855 aaKnown RBP13.71□□□□□ -0.21
COPS3-214ENST00000577246 CCDC81Q6ZN84 652 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 RBM44Q6ZP01 1051 aaKnown RBP13.71□□□□□ -0.21
COPS3-214ENST00000577246 ABI3BPQ7Z7G0 1075 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 ZSCAN30Q86W11 494 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 SH2D3CQ8N5H7 860 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 WDR48Q8TAF3 677 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 STK32AQ8WU08 396 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 SLC35C1Q96A29 364 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 PPP1R16AQ96I34 528 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 SLC46A1Q96NT5 459 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 RPRD1AQ96P16 312 aaPredicted RBP13.71□□□□□ -0.21
COPS3-214ENST00000577246 FEM1AQ9BSK4 669 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 GTPBP4Q9BZE4 634 aaKnown RBP13.71□□□□□ -0.21
COPS3-214ENST00000577246 OSBPL2Q9H1P3 480 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 FAM204AQ9H8W3 233 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 SATB2Q9UPW6 733 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 SSUH2Q9Y2M2 353 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 HEMK1Q9Y5R4 338 aaPredicted RBP13.71□□□□□ -0.21
COPS3-214ENST00000577246 CSNK1G3Q9Y6M4 447 aa13.71□□□□□ -0.21
COPS3-214ENST00000577246 MYLKQ15746 1914 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 PMM2O15305 246 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 MED7O43513 233 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 CLDN11O75508 207 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 PCDH8O95206 1070 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 IGLV3-25P01717 112 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 GIMD1P0DJR0 217 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 RPIAP49247 311 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms