RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 IL17BQ9UHF5 180 aa10.41□□□□□ -0.74
NPLOC4-220ENST00000576940 RCOR1Q9UKL0 485 aa10.41□□□□□ -0.74
NPLOC4-220ENST00000576940 COQ4Q9Y3A0 265 aa10.41□□□□□ -0.74
NPLOC4-220ENST00000576940 CPED1A4D0V7 1026 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 NEMP2A6NFY4 417 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 M0QYV0 167 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 MCF2LO15068 1137 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 SCAMP1O15126 338 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 EFSO43281 561 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 STX10O60499 249 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 GP1BAP07359 652 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 ALPPL2P10696 532 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 BRD2P25440 801 aaKnown RBP10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 PLK1P53350 603 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 SKOR1P84550 965 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 DNM1Q05193 864 aaKnown RBP10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 SULT2A1Q06520 285 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 SRSF1Q07955 248 aaKnown RBP eCLIP10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 NFATC3Q12968 1075 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 SLC12A1Q13621 1099 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 CDKN3Q16667 212 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 ZNF284Q2VY69 593 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 ZSCAN23Q3MJ62 389 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 DCAF17Q5H9S7 520 aaPredicted RBP10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 PIP5KL1Q5T9C9 394 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 Q6ZSR6 202 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 Q6ZVU0 165 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 DSG4Q86SJ6 1040 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 SMYD4Q8IYR2 804 aaPredicted RBP10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 OR52K2Q8NGK3 314 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 KAT5Q92993 513 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 ARRDC3Q96B67 414 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 FAM149B1Q96BN6 582 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 ALG14Q96F25 216 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 BMFQ96LC9 184 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 DNAJC28Q9NX36 388 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 NLGN3Q9NZ94 848 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 PCDHB4Q9Y5E5 795 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 ENTPD2Q9Y5L3 495 aa10.4□□□□□ -0.74
NPLOC4-220ENST00000576940 KIF26BQ2KJY2 2108 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 NYNRINQ9P2P1 1898 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 C1QTNF3-AMACRE9PGA6 284 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 F5H5T6 163 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 CETN3O15182 167 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 ATP9BO43861 1147 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 FBXO21O94952 628 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 MT-CO1P00395 513 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 F13A1P00488 732 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 MYL1P05976 194 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 CTSLP07711 333 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 ZSCAN22P10073 491 aaPredicted RBP10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 EPB41P11171 864 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 CSRP3P50461 194 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 DUSP3P51452 185 aaPredicted RBP10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 YWHAEP62258 255 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 PITX1P78337 314 aaPredicted RBP10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 NFKB2Q00653 900 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 DPYDQ12882 1025 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 CLN3Q13286 438 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 DRAP1Q14919 205 aaPredicted RBP10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 ARL13BQ3SXY8 428 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 LINC00303Q3SY05 128 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 SEL1L3Q68CR1 1132 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 OR6B2Q6IFH4 312 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 CXorf57Q6NSI4 855 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 GUSBP11Q6P575 273 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 GCNT7Q6ZNI0 430 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 EFL1Q7Z2Z2 1120 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 HORMAD1Q86X24 394 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 LURAP1LQ8IV03 231 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 CCDC47Q96A33 483 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 PRMT1Q99873 361 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 FEM1AQ9BSK4 669 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 FAM117AQ9C073 453 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 PREBQ9HCU5 417 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 ST7Q9NRC1 585 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 KLF15Q9UIH9 416 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 CFAP45Q9UL16 551 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 ZFR2Q9UPR6 939 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 HPSEQ9Y251 543 aa10.39□□□□□ -0.75
NPLOC4-220ENST00000576940 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 KCNU1A8MYU2 1149 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 K7ELQ4 463 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 KPNA3O00505 521 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 TNFSF15O95150 251 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 PCDH8O95206 1070 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 TRUB2O95900 331 aaKnown RBP10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 PAK4O96013 591 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 APOEP02649 317 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 PAEPP09466 180 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 HNRNPA2B1P22626 353 aaKnown RBP10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 CMA1P23946 247 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 AKT2P31751 481 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 GPD2P43304 727 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 IRAK1P51617 712 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 ZNF177Q13360 481 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 NNTQ13423 1086 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 PKP1Q13835 747 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 EDRF1Q3B7T1 1238 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 COLEC12Q5KU26 742 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms