RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 F9P00740 461 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 WNT1P04628 370 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 CTSLP07711 333 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 TPM2P07951 284 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 RHOCP08134 193 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 C1QTNF9P0C862 333 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 CD27P26842 260 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 RDXP35241 583 aaKnown RBP12.2□□□□□ -0.46
LITAF-219ENST00000576334 RFC1P35251 1148 aaPredicted RBP12.2□□□□□ -0.46
LITAF-219ENST00000576334 ADPRHP54922 357 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 IL9RQ01113 521 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 CLEC16AQ2KHT3 1053 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 SMYD5Q6GMV2 418 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 CAVIN1Q6NZI2 390 aaKnown RBP12.2□□□□□ -0.46
LITAF-219ENST00000576334 USP30Q70CQ3 517 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 ZNF677Q86XU0 584 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 DRC7Q8IY82 874 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 SH2D3CQ8N5H7 860 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 CCDC185Q8N715 623 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 PNPLA1Q8N8W4 532 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 CHST14Q8NCH0 376 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 OR14C36Q8NHC7 312 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 ERGIC2Q96RQ1 377 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 TNKS2Q9H2K2 1166 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 CAAP1Q9H8G2 361 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 TAS2R14Q9NYV8 317 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 SLC25A13Q9UJS0 675 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 NCKAP1Q9Y2A7 1128 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 BTBD3Q9Y2F9 522 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 USP24Q9UPU5 2620 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 CFAP47Q6ZTR5 3102 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 FREM2Q5SZK8 3169 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 IGLV3-10A0A075B6K4 115 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 C2CD4BA6NLJ0 364 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 UPK3BL1B0FP48 263 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 C10orf142B7Z368 130 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 UPK3BL2E5RIL1 263 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 GOT1P17174 413 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 OR1E1P30953 314 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 MAT2AP31153 395 aaKnown RBP12.19□□□□□ -0.46
LITAF-219ENST00000576334 ACVRL1P37023 503 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 NNMTP40261 264 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 AFF3P51826 1226 aaKnown RBP12.19□□□□□ -0.46
LITAF-219ENST00000576334 HDAC4P56524 1084 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 SHC2P98077 582 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 SULT2A1Q06520 285 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 CNTN1Q12860 1018 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 ELAVL3Q14576 367 aaKnown RBP12.19□□□□□ -0.46
LITAF-219ENST00000576334 WDR59Q6PJI9 974 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 LEKR1Q6ZMV7 388 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 NAXDQ8IW45 347 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 PYROXD2Q8N2H3 581 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 ATP11CQ8NB49 1132 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 NETO2Q8NC67 525 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 PIP4K2CQ8TBX8 421 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 SPON2Q9BUD6 331 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 SCNM1Q9BWG6 230 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 PCED1AQ9H1Q7 454 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 SLC32A1Q9H598 525 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 TM7SF3Q9NS93 570 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 ADAM22Q9P0K1 906 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 ADAMTS1Q9UHI8 967 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 KLK13Q9UKR3 277 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 CA5BQ9Y2D0 317 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 ANKRD6Q9Y2G4 727 aa12.19□□□□□ -0.46
LITAF-219ENST00000576334 TBC1D3DA0A087WVF3 549 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 TBC1D3IA0A087WXS9 549 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 TBC1D3EA0A087X179 549 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 TBC1D3KA0A087X1G2 549 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 A0A1W2PPC4 97 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 TCRBV5S1A1TA0A578 114 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 TBC1D3FA6NER0 549 aaPredicted RBP12.18□□□□□ -0.46
LITAF-219ENST00000576334 TMCO5BA8MYB1 307 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 TBC1D3LB9A6J9 549 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 H0Y8X5 98 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 CBX4O00257 560 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 ZNF821O75541 412 aaPredicted RBP12.18□□□□□ -0.46
LITAF-219ENST00000576334 ADH1BP00325 375 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 TBC1D3HP0C7X1 549 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 C5AR1P21730 350 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 SDC4P31431 198 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 ADRA1BP35368 520 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 NSFP46459 744 aaKnown RBP12.18□□□□□ -0.46
LITAF-219ENST00000576334 TAS2R38P59533 333 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 RPL7AP62424 266 aaKnown RBP12.18□□□□□ -0.46
LITAF-219ENST00000576334 AGBL4Q5VU57 503 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 E4F1Q66K89 784 aaPredicted RBP12.18□□□□□ -0.46
LITAF-219ENST00000576334 TBC1D3GQ6DHY5 549 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 TBC1D3CQ6IPX1 549 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 LRRC31Q6UY01 552 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 MON1BQ7L1V2 547 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 IRF2BP2Q7Z5L9 587 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 TBC1D3Q8IZP1 549 aaPredicted RBP12.18□□□□□ -0.46
LITAF-219ENST00000576334 CHCHD4Q8N4Q1 142 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 MSANTD4Q8NCY6 345 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 OR2A12Q8NGT7 310 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 OR2T34Q8NGX1 318 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 SETD7Q8WTS6 366 aaKnown RBP12.18□□□□□ -0.46
LITAF-219ENST00000576334 FAM172AQ8WUF8 416 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 OR8D1Q8WZ84 308 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms