RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 CCDC117Q8IWD4 279 aaPredicted RBP16.03■□□□□ 0.16
LITAF-218ENST00000576036 ZNF366Q8N895 744 aa16.03■□□□□ 0.16
LITAF-218ENST00000576036 RPL10LQ96L21 214 aaKnown RBP16.03■□□□□ 0.16
LITAF-218ENST00000576036 MTG2Q9H4K7 406 aa16.03■□□□□ 0.16
LITAF-218ENST00000576036 PRMT8Q9NR22 394 aaPredicted RBP16.03■□□□□ 0.16
LITAF-218ENST00000576036 TRMT1Q9NXH9 659 aaKnown RBP16.03■□□□□ 0.16
LITAF-218ENST00000576036 AMFRQ9UKV5 643 aa16.03■□□□□ 0.16
LITAF-218ENST00000576036 K7ESF4 209 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 DAPK3O43293 454 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 ASLP04424 464 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 HLA-EP13747 358 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 NTSR1P30989 418 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 VASPP50552 380 aaPredicted RBP16.02■□□□□ 0.16
LITAF-218ENST00000576036 NDST2P52849 883 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 YBEYP58557 167 aaPredicted RBP16.02■□□□□ 0.16
LITAF-218ENST00000576036 ECT2LQ008S8 904 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 SLC10A2Q12908 348 aaPredicted RBP16.02■□□□□ 0.16
LITAF-218ENST00000576036 SERINC3Q13530 473 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 POLD3Q15054 466 aaPredicted RBP16.02■□□□□ 0.16
LITAF-218ENST00000576036 PAFAH1B3Q15102 231 aaKnown RBP16.02■□□□□ 0.16
LITAF-218ENST00000576036 HSF5Q4G112 596 aaPredicted RBP16.02■□□□□ 0.16
LITAF-218ENST00000576036 SLC9A4Q6AI14 798 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 KIAA1211LQ6NV74 962 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 AADACL2Q6P093 401 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 LINGO4Q6UY18 593 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 SPOCD1Q6ZMY3 1216 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 NUDT18Q6ZVK8 323 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 SYT13Q7L8C5 426 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 PEX26Q7Z412 305 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 PLD5Q8N7P1 536 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 EXD1Q8NHP7 514 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 FRS2Q8WU20 508 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 UCMAQ8WVF2 138 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 IER2Q9BTL4 223 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 SPON2Q9BUD6 331 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 PDFQ9HBH1 243 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 ATP13A1Q9HD20 1204 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 RAD54BQ9Y620 910 aa16.02■□□□□ 0.16
LITAF-218ENST00000576036 hCG_1818297A0A087WSY0 165 aa16.01■□□□□ 0.15
LITAF-218ENST00000576036 CCDC66A2RUB6 948 aa16.01■□□□□ 0.15
LITAF-218ENST00000576036 TTC34A8MYJ7 566 aa16.01■□□□□ 0.15
LITAF-218ENST00000576036 K7ERQ8 282 aa16.01■□□□□ 0.15
LITAF-218ENST00000576036 SMAD6O43541 496 aaKnown RBP16.01■□□□□ 0.15
LITAF-218ENST00000576036 KDELR3O43731 214 aa16.01■□□□□ 0.15
LITAF-218ENST00000576036 PAPSS2O95340 614 aaPredicted RBP16.01■□□□□ 0.15
LITAF-218ENST00000576036 ATP5BP06576 529 aaKnown RBP16.01■□□□□ 0.15
LITAF-218ENST00000576036 SRPRAP08240 638 aaKnown RBP16.01■□□□□ 0.15
LITAF-218ENST00000576036 KRT10P13645 584 aa16.01■□□□□ 0.15
LITAF-218ENST00000576036 VAV1P15498 845 aa16.01■□□□□ 0.15
LITAF-218ENST00000576036 PAPOLAP51003 745 aaKnown RBP16.01■□□□□ 0.15
LITAF-218ENST00000576036 GBE1Q04446 702 aa16.01■□□□□ 0.15
LITAF-218ENST00000576036 LLGL1Q15334 1064 aa16.01■□□□□ 0.15
LITAF-218ENST00000576036 PARP15Q460N3 678 aa16.01■□□□□ 0.15
LITAF-218ENST00000576036 MEI1Q5TIA1 1274 aa16.01■□□□□ 0.15
LITAF-218ENST00000576036 TMCO3Q6UWJ1 677 aa16.01■□□□□ 0.15
LITAF-218ENST00000576036 MAP7D3Q8IWC1 876 aa16.01■□□□□ 0.15
LITAF-218ENST00000576036 CHPFQ8IZ52 775 aa16.01■□□□□ 0.15
LITAF-218ENST00000576036 SYCE1Q8N0S2 351 aa16.01■□□□□ 0.15
LITAF-218ENST00000576036 ERLEC1Q96DZ1 483 aa16.01■□□□□ 0.15
LITAF-218ENST00000576036 C2orf49Q9BVC5 232 aaPredicted RBP16.01■□□□□ 0.15
LITAF-218ENST00000576036 HS3ST2Q9Y278 367 aa16.01■□□□□ 0.15
LITAF-218ENST00000576036 J3KR12 359 aa16■□□□□ 0.15
LITAF-218ENST00000576036 CBX4O00257 560 aa16■□□□□ 0.15
LITAF-218ENST00000576036 ATP9BO43861 1147 aa16■□□□□ 0.15
LITAF-218ENST00000576036 ZNF821O75541 412 aaPredicted RBP16■□□□□ 0.15
LITAF-218ENST00000576036 PYGMP11217 842 aa16■□□□□ 0.15
LITAF-218ENST00000576036 SRCP12931 536 aa16■□□□□ 0.15
LITAF-218ENST00000576036 SULT2A1Q06520 285 aa16■□□□□ 0.15
LITAF-218ENST00000576036 DMWDQ09019 674 aa16■□□□□ 0.15
LITAF-218ENST00000576036 CRY1Q16526 586 aa16■□□□□ 0.15
LITAF-218ENST00000576036 FNDC3BQ53EP0 1204 aaKnown RBP16■□□□□ 0.15
LITAF-218ENST00000576036 ZFYVE27Q5T4F4 411 aa16■□□□□ 0.15
LITAF-218ENST00000576036 IL31Q6EBC2 164 aa16■□□□□ 0.15
LITAF-218ENST00000576036 LEKR1Q6ZMV7 388 aa16■□□□□ 0.15
LITAF-218ENST00000576036 RCOR2Q8IZ40 523 aa16■□□□□ 0.15
LITAF-218ENST00000576036 C17orf53Q8N3J3 647 aaPredicted RBP16■□□□□ 0.15
LITAF-218ENST00000576036 SH2D3CQ8N5H7 860 aa16■□□□□ 0.15
LITAF-218ENST00000576036 KDM1BQ8NB78 822 aa16■□□□□ 0.15
LITAF-218ENST00000576036 CCDC26Q8TAB7 109 aa16■□□□□ 0.15
LITAF-218ENST00000576036 ACDQ96AP0 544 aa16■□□□□ 0.15
LITAF-218ENST00000576036 VOPP1Q96AW1 172 aa16■□□□□ 0.15
LITAF-218ENST00000576036 TLR10Q9BXR5 811 aa16■□□□□ 0.15
LITAF-218ENST00000576036 SPATA6Q9NWH7 488 aaPredicted RBP16■□□□□ 0.15
LITAF-218ENST00000576036 MIF4GDA9UHW6 222 aaKnown RBP15.99■□□□□ 0.15
LITAF-218ENST00000576036 NPC1O15118 1278 aa15.99■□□□□ 0.15
LITAF-218ENST00000576036 ZSCAN12O43309 604 aa15.99■□□□□ 0.15
LITAF-218ENST00000576036 PRAMEF11O60813 436 aa15.99■□□□□ 0.15
LITAF-218ENST00000576036 ZRANB2O95218 330 aaKnown RBP eCLIP15.99■□□□□ 0.15
LITAF-218ENST00000576036 MAP3K6O95382 1288 aa15.99■□□□□ 0.15
LITAF-218ENST00000576036 PEX11BO96011 259 aa15.99■□□□□ 0.15
LITAF-218ENST00000576036 HOXB2P14652 356 aa15.99■□□□□ 0.15
LITAF-218ENST00000576036 PTPN7P35236 360 aa15.99■□□□□ 0.15
LITAF-218ENST00000576036 ETFBP38117 255 aa15.99■□□□□ 0.15
LITAF-218ENST00000576036 SERPINH1P50454 418 aaKnown RBP15.99■□□□□ 0.15
LITAF-218ENST00000576036 RWDD2BP57060 319 aa15.99■□□□□ 0.15
LITAF-218ENST00000576036 GALNT2Q10471 571 aa15.99■□□□□ 0.15
LITAF-218ENST00000576036 ZNF211Q13398 564 aaPredicted RBP15.99■□□□□ 0.15
LITAF-218ENST00000576036 CAMK2GQ13555 558 aaPredicted RBP15.99■□□□□ 0.15
LITAF-218ENST00000576036 PPP2R5EQ16537 467 aa15.99■□□□□ 0.15
LITAF-218ENST00000576036 TFDP3Q5H9I0 405 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms