RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 TLE1Q04724 770 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 SULT2A1Q06520 285 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 SRSF6Q13247 344 aaKnown RBP16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 UBAP2LQ14157 1087 aaKnown RBP16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 DRAP1Q14919 205 aaPredicted RBP16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 TGIF1Q15583 401 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 DEFB133Q30KQ1 61 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 PTAR1Q7Z6K3 402 aaPredicted RBP16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 HORMAD1Q86X24 394 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 SCML4Q8N228 414 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 ZNF548Q8NEK5 533 aaPredicted RBP16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 TPCN2Q8NHX9 752 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 IRGQQ8WZA9 623 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 IFT43Q96FT9 208 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 FAXDC2Q96IV6 333 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 ZSCAN16Q9H4T2 348 aaPredicted RBP16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 SYNDIG1Q9H7V2 258 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 RAB20Q9NX57 234 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 NCKIPSDQ9NZQ3 722 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 MTMR6Q9Y217 621 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 TLR6Q9Y2C9 796 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 MCF2LO15068 1137 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 MUSKO15146 869 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 GABBR2O75899 941 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 PCDH8O95206 1070 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 ITGB2P05107 769 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 ITGA2BP08514 1039 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 SETSIPP0DME0 302 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 SFTPCP11686 197 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 GP1BBP13224 206 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 TACR2P21452 398 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 PSMC2P35998 433 aaKnown RBP16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 CUL4AQ13619 759 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 SLC12A1Q13621 1099 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 NR0B2Q15466 257 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 DLG2Q15700 870 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 PERM1Q5SV97 790 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 PIP5KL1Q5T9C9 394 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 PMF1Q6P1K2 205 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 GCNT7Q6ZNI0 430 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 Q6ZVU0 165 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 ABI3BPQ7Z7G0 1075 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 CHSY1Q86X52 802 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 CIR1Q86X95 450 aaPredicted RBP16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 JAMLQ86YT9 394 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 CEP57L1Q8IYX8 460 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 FBXL13Q8NEE6 735 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 DQX1Q8TE96 717 aaKnown RBP16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 EEF2KMTQ96G04 330 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 SERPINB11Q96P15 392 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 MIS12Q9H081 205 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 TRAF3IP3Q9Y228 551 aa16.73■□□□□ 0.27
CTDNEP1-211ENST00000575783 DOPEY2Q9Y3R5 2298 aa16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 CCDC187A0A096LP49 1063 aa16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 EME2A4GXA9 379 aaPredicted RBP16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 O00370 1275 aa16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 TCEA3O75764 348 aa16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 VDRP11473 427 aa16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 SLC5A2P31639 672 aa16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 GTF2H1P32780 548 aa16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 MLLT3P42568 568 aaPredicted RBP16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 FZD2Q14332 565 aa16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 SEL1L3Q68CR1 1132 aa16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 NEK5Q6P3R8 708 aa16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 C14orf80Q86SX3 495 aa16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 LMX1AQ8TE12 382 aa16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 SLC39A13Q96H72 371 aa16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 FAM13BQ9NYF5 915 aa16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 SERTAD1Q9UHV2 236 aa16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 IPO11Q9UI26 975 aaKnown RBP16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 SLC25A13Q9UJS0 675 aa16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 NAALADL1Q9UQQ1 740 aa16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 TLN1Q9Y490 2541 aaKnown RBP16.72■□□□□ 0.27
CTDNEP1-211ENST00000575783 AHCTF1Q8WYP5 2266 aa16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 A6NNZ2 444 aa16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 H3BM21 787 aa16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 KPNA3O00505 521 aaPredicted RBP16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 AQP9O43315 295 aa16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 ATP9BO43861 1147 aa16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 NOBOXO60393 691 aa16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 CSF2P04141 144 aa16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 FYNP06241 537 aa16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 MXI1P50539 228 aa16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 MAPK8IP2Q13387 824 aaPredicted RBP16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 ADAM9Q13443 819 aa16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 ZC3H12AQ5D1E8 599 aaKnown RBP16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 DCP2Q8IU60 420 aaKnown RBP16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 CCAR2Q8N163 923 aaKnown RBP16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 SLC35F5Q8WV83 523 aa16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 ERCC4Q92889 916 aaPredicted RBP16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 BMFQ96LC9 184 aa16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 ZNF396Q96N95 335 aaPredicted RBP16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 IL12RB2Q99665 862 aa16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 SALL4Q9UJQ4 1053 aa16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 ZFR2Q9UPR6 939 aaKnown RBP16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 MAPK8IP1Q9UQF2 711 aa16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 CSNK1G3Q9Y6M4 447 aa16.71■□□□□ 0.27
CTDNEP1-211ENST00000575783 LRRK2Q5S007 2527 aa16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 POM121BA6NF01 834 aa16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 F5H5T6 163 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms