RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 ERCC4Q92889 916 aaPredicted RBP10.26□□□□□ -0.77
CALCOCO2-227ENST00000575560 IFT43Q96FT9 208 aa10.26□□□□□ -0.77
CALCOCO2-227ENST00000575560 MED8Q96G25 268 aa10.26□□□□□ -0.77
CALCOCO2-227ENST00000575560 APOLD1Q96LR9 279 aa10.26□□□□□ -0.77
CALCOCO2-227ENST00000575560 SLC46A1Q96NT5 459 aa10.26□□□□□ -0.77
CALCOCO2-227ENST00000575560 FEM1AQ9BSK4 669 aa10.26□□□□□ -0.77
CALCOCO2-227ENST00000575560 USP29Q9HBJ7 922 aa10.26□□□□□ -0.77
CALCOCO2-227ENST00000575560 THSD1Q9NS62 852 aa10.26□□□□□ -0.77
CALCOCO2-227ENST00000575560 NLGN3Q9NZ94 848 aa10.26□□□□□ -0.77
CALCOCO2-227ENST00000575560 TJP2Q9UDY2 1190 aa10.26□□□□□ -0.77
CALCOCO2-227ENST00000575560 UBR5O95071 2799 aaPredicted RBP10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 A0A1W2PQU0 124 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 KCNU1A8MYU2 1149 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 C1QTNF3-AMACRE9PGA6 284 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 PYCARD-AS1I3L0S3 204 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 K7ENP7 123 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 K7ESM1 405 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 M0QYV0 167 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 SLC16A3O15427 465 aaKnown RBP10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 SLC31A1O15431 190 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 SART1O43290 800 aaKnown RBP10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 WISP1O95388 367 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 CALCAP01258 141 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 ALPPL2P10696 532 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 PRLRP16471 622 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 BRD2P25440 801 aaKnown RBP10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 GPD2P43304 727 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 NUMBP49757 651 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 DUSP3P51452 185 aaPredicted RBP10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 OXCT1P55809 520 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 NUCB2P80303 420 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 DLG2Q15700 870 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 ACCSLQ4AC99 568 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 DCAF17Q5H9S7 520 aaPredicted RBP10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 TCERG1LQ5VWI1 586 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 INO80CQ6PI98 192 aaPredicted RBP10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 ABI3BPQ7Z7G0 1075 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 CHSY1Q86X52 802 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 CIR1Q86X95 450 aaPredicted RBP10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 SMYD4Q8IYR2 804 aaPredicted RBP10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 OR13H1Q8NG92 308 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 OR52K2Q8NGK3 314 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 SLC35C1Q96A29 364 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 GRAMD1AQ96CP6 724 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 PRR11Q96HE9 360 aaPredicted RBP10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 VCPIP1Q96JH7 1222 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 NOX5Q96PH1 765 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 ABCG4Q9H172 646 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 OSBPL2Q9H1P3 480 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 PCDHB4Q9Y5E5 795 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 OR51B4Q9Y5P0 310 aa10.25□□□□□ -0.77
CALCOCO2-227ENST00000575560 TCAF2A6NFQ2 919 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 NEMP2A6NFY4 417 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 F5H5T6 163 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 PMM2O15305 246 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 ARHGAP6O43182 974 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 TRUB2O95900 331 aaKnown RBP10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 APOEP02649 317 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 CTSLP07711 333 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 CD44P16070 742 aaKnown RBP10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 ZNF18P17022 549 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 TGM2P21980 687 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 HNRNPA2B1P22626 353 aaKnown RBP10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 PRCPP42785 496 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 PITX1P78337 314 aaPredicted RBP10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 TTC39BQ5VTQ0 682 aaPredicted RBP10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 FBXL22Q6P050 247 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 KRBA2Q6ZNG9 492 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 GCNT7Q6ZNI0 430 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 Q6ZVU0 165 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 HORMAD1Q86X24 394 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 SLC22A18ASQ8N1D0 253 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 SH2D3CQ8N5H7 860 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 ATP6V0D2Q8N8Y2 350 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 LMO3Q8TAP4 145 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 FAM174AQ8TBP5 190 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 IFI44Q8TCB0 444 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 STK32AQ8WU08 396 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 KLK6Q92876 244 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 KAT5Q92993 513 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 FAM149B1Q96BN6 582 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 BMFQ96LC9 184 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 PPP1R9BQ96SB3 815 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 MYOCQ99972 504 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 TRIM62Q9BVG3 475 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 DUSP23Q9BVJ7 150 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 CALN1Q9BXU9 219 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 SLC4A5Q9BY07 1137 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 POPDC2Q9HBU9 364 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 GPR27Q9NS67 375 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 ARMCX3Q9UH62 379 aaPredicted RBP10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 ZFR2Q9UPR6 939 aaKnown RBP10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 SATB2Q9UPW6 733 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 PCDHGA8Q9Y5G5 932 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 BSNQ9UPA5 3926 aa10.24□□□□□ -0.77
CALCOCO2-227ENST00000575560 CDRT15L2A8MXV6 281 aa10.23□□□□□ -0.77
CALCOCO2-227ENST00000575560 RNF103O00237 685 aa10.23□□□□□ -0.77
CALCOCO2-227ENST00000575560 SLC28A2O43868 658 aa10.23□□□□□ -0.77
CALCOCO2-227ENST00000575560 NEBLO76041 1014 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms