RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 FSBPO95073 299 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 ADH1BP00325 375 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 TPM2P07951 284 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 ZNF883P0CG24 379 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 SRCP12931 536 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 GOT1P17174 413 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 C5AR1P21730 350 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 PTPN9P43378 593 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 GRIA4P48058 902 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 AFF3P51826 1226 aaKnown RBP17.88■□□□□ 0.45
SMG6-214ENST00000573827 ADPRHP54922 357 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 NRG1Q02297 640 aaPredicted RBP17.88■□□□□ 0.45
SMG6-214ENST00000573827 C15orf59Q2T9L4 293 aaPredicted RBP17.88■□□□□ 0.45
SMG6-214ENST00000573827 HLA-BQ31612 363 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 ANO6Q4KMQ2 910 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 ACBD5Q5T8D3 534 aaPredicted RBP17.88■□□□□ 0.45
SMG6-214ENST00000573827 LAYNQ6UX15 382 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 SND1Q7KZF4 910 aaKnown RBP eCLIP17.88■□□□□ 0.45
SMG6-214ENST00000573827 MON1BQ7L1V2 547 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 NEK11Q8NG66 645 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 BAP1Q92560 729 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 FUCA2Q9BTY2 467 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 MAGEB5Q9BZ81 275 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 VPS51Q9UID3 782 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 PAXBP1Q9Y5B6 917 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 CELSR3Q9NYQ7 3312 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 PLXNA2O75051 1894 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 A0A1W2PPC4 97 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 K7ERQ8 282 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 RNF103O00237 685 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 PLK4O00444 970 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 WNT9AO14904 365 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 MCF2LO15068 1137 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 SMAD6O43541 496 aaKnown RBP17.87■□□□□ 0.45
SMG6-214ENST00000573827 GLDCP23378 1020 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 RFC1P35251 1148 aaPredicted RBP17.87■□□□□ 0.45
SMG6-214ENST00000573827 ADRA1BP35368 520 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 HDAC4P56524 1084 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 ATP11AP98196 1134 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 Q6ZVU0 165 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 IRF2BP2Q7Z5L9 587 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 TFAP2DQ7Z6R9 452 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 DCAF4L2Q8NA75 395 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 OR2T34Q8NGX1 318 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 BAHD1Q8TBE0 780 aaPredicted RBP17.87■□□□□ 0.45
SMG6-214ENST00000573827 SNX19Q92543 992 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 VOPP1Q96AW1 172 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 PPP1R9BQ96SB3 815 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 SLC32A1Q9H598 525 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 GAREM1Q9H706 876 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 RTN4Q9NQC3 1192 aaKnown RBP17.87■□□□□ 0.45
SMG6-214ENST00000573827 PPARGC1AQ9UBK2 798 aaKnown RBP17.87■□□□□ 0.45
SMG6-214ENST00000573827 NCKAP1Q9Y2A7 1128 aa17.87■□□□□ 0.45
SMG6-214ENST00000573827 DOCK9Q9BZ29 2069 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 ARID1BQ8NFD5 2236 aaPredicted RBP17.86■□□□□ 0.45
SMG6-214ENST00000573827 FAM72CH0Y354 149 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 ALOX15BO15296 676 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 LATO43561 262 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 CD160O95971 181 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 WNT1P04628 370 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 CTSLP07711 333 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 RHOCP08134 193 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 NNMTP40261 264 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 CTSKP43235 329 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 CCR5P51681 352 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 PPP2CBP62714 309 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 PPP2CAP67775 309 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 PPP1R15BQ5SWA1 713 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 FAM72AQ5TYM5 149 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 AGBL4Q5VU57 503 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 FAM72DQ6L9T8 149 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 STRADAQ7RTN6 431 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 NLRP14Q86W24 1093 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 FAM72BQ86X60 149 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 ANKRD20A12PQ8NF67 263 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 OR7D4Q8NG98 312 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 OR2A12Q8NGT7 310 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 GANCQ8TET4 914 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 SLC6A18Q96N87 628 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 AGPAT1Q99943 283 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 MUC3BQ9H195 1237 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 OSBPL2Q9H1P3 480 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 ADAM22Q9P0K1 906 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 SLC25A13Q9UJS0 675 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 ANKRD6Q9Y2G4 727 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 SNX11Q9Y5W9 270 aa17.86■□□□□ 0.45
SMG6-214ENST00000573827 A0A1W2PR77 199 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 ILVBLA1L0T0 632 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 APC2O95996 2303 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 IL1BP01584 269 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 SPINK2P20155 84 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 CDK11BP21127 795 aaKnown RBP17.85■□□□□ 0.45
SMG6-214ENST00000573827 SDC4P31431 198 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 NSFP46459 744 aaKnown RBP17.85■□□□□ 0.45
SMG6-214ENST00000573827 TAS2R38P59533 333 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 RACK1P63244 317 aaKnown RBP17.85■□□□□ 0.45
SMG6-214ENST00000573827 SIM1P81133 766 aaPredicted RBP17.85■□□□□ 0.45
SMG6-214ENST00000573827 SFSWAPQ12872 951 aaKnown RBP17.85■□□□□ 0.45
SMG6-214ENST00000573827 FOXC1Q12948 553 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 ZNF423Q2M1K9 1284 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms