RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 PRAMEF11O60813 436 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 TBX10O75333 385 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 METTL18O95568 372 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 HOXD9P28356 352 aaPredicted RBP13.98□□□□□ -0.17
CCDC40-209ENST00000573474 MAGEA6P43360 314 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 RENBPP51606 427 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 OXCT1P55809 520 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 BASP1P80723 227 aaKnown RBP13.98□□□□□ -0.17
CCDC40-209ENST00000573474 DLX2Q07687 328 aaPredicted RBP13.98□□□□□ -0.17
CCDC40-209ENST00000573474 ZBTB17Q13105 803 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 HNRNPDQ14103 355 aaKnown RBP13.98□□□□□ -0.17
CCDC40-209ENST00000573474 RNF219Q5W0B1 726 aaPredicted RBP13.98□□□□□ -0.17
CCDC40-209ENST00000573474 ITPRIPL1Q6GPH6 555 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 CXorf57Q6NSI4 855 aaKnown RBP13.98□□□□□ -0.17
CCDC40-209ENST00000573474 TPGS1Q6ZTW0 290 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 TAB3Q8N5C8 712 aaPredicted RBP13.98□□□□□ -0.17
CCDC40-209ENST00000573474 NAT8LQ8N9F0 302 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 OR7D4Q8NG98 312 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 IRF7Q92985 503 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 PABPC5Q96DU9 382 aaKnown RBP13.98□□□□□ -0.17
CCDC40-209ENST00000573474 TEKT5Q96M29 485 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 GAS2L1Q99501 681 aaPredicted RBP13.98□□□□□ -0.17
CCDC40-209ENST00000573474 SPON2Q9BUD6 331 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 ACE2Q9BYF1 805 aaPredicted RBP13.98□□□□□ -0.17
CCDC40-209ENST00000573474 MUC3BQ9H195 1237 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 LINC00597Q9H2U6 94 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 ETNK1Q9HBU6 452 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 IGSF9Q9P2J2 1179 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 CDH22Q9UJ99 828 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.97□□□□□ -0.17
CCDC40-209ENST00000573474 A0A0D9SEW6 157 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 J3KR12 359 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 SOX1O00570 391 aaPredicted RBP13.97□□□□□ -0.17
CCDC40-209ENST00000573474 ZBTB24O43167 697 aaPredicted RBP13.97□□□□□ -0.17
CCDC40-209ENST00000573474 NEBLO76041 1014 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 PEX11BO96011 259 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 PENKP01210 267 aaPredicted RBP13.97□□□□□ -0.17
CCDC40-209ENST00000573474 LTBRP36941 435 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 VIPR2P41587 438 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 TNNT3P45378 269 aaPredicted RBP13.97□□□□□ -0.17
CCDC40-209ENST00000573474 SEMA5AQ13591 1074 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 CDH18Q13634 790 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 KCNJ11Q14654 390 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 FAM182AQ5T1J6 154 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 FYB2Q5VWT5 728 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 IL31Q6EBC2 164 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 CEP128Q6ZU80 1094 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 TMEM25Q86YD3 366 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 MFN1Q8IWA4 741 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 ADGRG2Q8IZP9 1017 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 ZCCHC9Q8N567 271 aaKnown RBP13.97□□□□□ -0.17
CCDC40-209ENST00000573474 OR52K2Q8NGK3 314 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 FIBINQ8TAL6 211 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 BPIFB1Q8TDL5 484 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 USP33Q8TEY7 942 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 OSCP1Q8WVF1 389 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 PRCCQ92733 491 aaPredicted RBP13.97□□□□□ -0.17
CCDC40-209ENST00000573474 EXOC4Q96A65 974 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 E2F7Q96AV8 911 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 RSPRY1Q96DX4 576 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 MSLNLQ96KJ4 702 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 ZNF599Q96NL3 588 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 AGAP3Q96P47 875 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 LRRC3BQ96PB8 259 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 CEP41Q9BYV8 373 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 ATP13A1Q9HD20 1204 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 SPHK2Q9NRA0 654 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 RBM22Q9NW64 420 aaKnown RBP eCLIP13.97□□□□□ -0.17
CCDC40-209ENST00000573474 DUS2Q9NX74 493 aaKnown RBP13.97□□□□□ -0.17
CCDC40-209ENST00000573474 HPCAL4Q9UM19 191 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 WNT6Q9Y6F9 365 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 NUP205Q92621 2012 aa13.97□□□□□ -0.17
CCDC40-209ENST00000573474 C2orf16Q68DN1 1984 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 HEPACAM2A8MVW5 462 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 E7EVH7 732 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 TPSB2P20231 275 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 CD68P34810 354 aaPredicted RBP13.96□□□□□ -0.17
CCDC40-209ENST00000573474 IFNAR2P48551 515 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 CDK16Q00536 496 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 TNK2Q07912 1038 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 SLMAPQ14BN4 828 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 TPSAB1Q15661 275 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 FSCBQ5H9T9 825 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 FAXCQ5TGI0 409 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 MARC1Q5VT66 337 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 ANKRD22Q5VYY1 191 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 PPP1R21Q6ZMI0 780 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 TEX26Q8N6G2 289 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 CNTD1Q8N815 330 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 ZNF557Q8N988 423 aaPredicted RBP13.96□□□□□ -0.17
CCDC40-209ENST00000573474 BHMTQ93088 406 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 NECTIN4Q96NY8 510 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 PPP1R2P1Q96PQ5 205 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 FEM1AQ9BSK4 669 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 FRMD8Q9BZ67 464 aaPredicted RBP13.96□□□□□ -0.17
CCDC40-209ENST00000573474 GBA3Q9H227 469 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 GLOD4Q9HC38 313 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 ZFP14Q9HCL3 533 aa13.96□□□□□ -0.17
CCDC40-209ENST00000573474 THG1LQ9NWX6 298 aaKnown RBP13.96□□□□□ -0.17
CCDC40-209ENST00000573474 PLK2Q9NYY3 685 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms