RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 PLK4O00444 970 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 FLRT2O43155 660 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 ATP9BO43861 1147 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 SNAP91O60641 907 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 KRT37O76014 449 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 FTH1P19P0C7X4 201 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 C7P10643 843 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 OR1E1P30953 314 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 SDC4P31431 198 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 RECQLP46063 649 aaPredicted RBP9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 NSFP46459 744 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 RACK1P63244 317 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 IL9RQ01113 521 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 FMO1Q01740 532 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 CDR2Q01850 454 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 UBXN1Q04323 297 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 INAVAQ3KP66 663 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 ARL13BQ3SXY8 428 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 SLC45A4Q5BKX6 768 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 C6orf118Q5T5N4 469 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 CCDC183Q5T5S1 534 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 ACBD5Q5T8D3 534 aaPredicted RBP9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 TRIM72Q6ZMU5 477 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 SETD3Q86TU7 594 aaPredicted RBP9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 CHCHD4Q8N4Q1 142 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 SLC30A5Q8TAD4 765 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 PIP4K2CQ8TBX8 421 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 RHBDD1Q8TEB9 315 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 FRS2Q8WU20 508 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 NT5C3BQ969T7 300 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 OSGEPQ9NPF4 335 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 ANLNQ9NQW6 1124 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 DYRK4Q9NR20 520 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 TMEM51Q9NW97 253 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 VPS51Q9UID3 782 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 NOCTQ9UK39 431 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 KLK13Q9UKR3 277 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 APOBEC2Q9Y235 224 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 TBC1D30Q9Y2I9 924 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 NEUROG3Q9Y4Z2 214 aa9.9□□□□□ -0.82
NPLOC4-212ENST00000573328 ANKRD36A6QL64 1941 aa9.9□□□□□ -0.83
NPLOC4-212ENST00000573328 PLXNB3Q9ULL4 1909 aa9.9□□□□□ -0.83
NPLOC4-212ENST00000573328 LGALS16A8MUM7 142 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 I6L893 689 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 CBX4O00257 560 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 KPNA3O00505 521 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 KCNK3O14649 394 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 EPHB6O15197 1021 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 ALOX15BO15296 676 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 RTN2O75298 545 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 PROS1P07225 676 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 SRCP12931 536 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 RRM1P23921 792 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 CD38P28907 300 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 MAT2AP31153 395 aaKnown RBP9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 DRD3P35462 400 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 METAP1P53582 386 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 JAM2P57087 298 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 PPP2CBP62714 309 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 PPP2CAP67775 309 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 C15orf59Q2T9L4 293 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 C5orf22Q49AR2 442 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 CCDC157Q569K6 752 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 TRNP1Q6NT89 227 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 RWDD4Q6NW29 188 aaKnown RBP9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 C22orf39Q6P5X5 142 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 LINGO4Q6UY18 593 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 PRPF39Q86UA1 669 aaKnown RBP9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 DRC7Q8IY82 874 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 AOPEPQ8N6M6 819 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 PNPLA1Q8N8W4 532 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 DCAF4L2Q8NA75 395 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 OR7D4Q8NG98 312 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 GRIN3AQ8TCU5 1115 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 RXFP2Q8WXD0 754 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 ALG14Q96F25 216 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 SERAC1Q96JX3 654 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 HAPLN3Q96S86 360 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 SPON2Q9BUD6 331 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 SELENOOQ9BVL4 669 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 ZYG11BQ9C0D3 744 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 ATP13A1Q9HD20 1204 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 ADAM22Q9P0K1 906 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 LIMA1Q9UHB6 759 aaKnown RBP9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 TMEM59LQ9UK28 342 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 PCOLCE2Q9UKZ9 415 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 SARDHQ9UL12 918 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 SIK3Q9Y2K2 1263 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 PCDHGB2Q9Y5G2 931 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 WDFY3Q8IZQ1 3526 aa9.89□□□□□ -0.83
NPLOC4-212ENST00000573328 ASPMQ8IZT6 3477 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 IGF2RP11717 2491 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 A0A0D9SEW6 157 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 ANKRD62A6NC57 917 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 H0Y8X5 98 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 MCF2LO15068 1137 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 VILLO15195 856 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 SLC7A4O43246 635 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 PLRG1O43660 514 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 ENDOD1O94919 500 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms