RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 FOXD4L3Q6VB84 417 aaPredicted RBP12.63□□□□□ -0.39
SMIM28-201ENST00000573100 CHSY1Q86X52 802 aa12.63□□□□□ -0.39
SMIM28-201ENST00000573100 ARL14Q8N4G2 192 aa12.63□□□□□ -0.39
SMIM28-201ENST00000573100 EXD3Q8N9H8 876 aa12.63□□□□□ -0.39
SMIM28-201ENST00000573100 TPCN2Q8NHX9 752 aa12.63□□□□□ -0.39
SMIM28-201ENST00000573100 CLEC4CQ8WTT0 213 aa12.63□□□□□ -0.39
SMIM28-201ENST00000573100 CCDC47Q96A33 483 aaKnown RBP12.63□□□□□ -0.39
SMIM28-201ENST00000573100 HSFY1Q96LI6 401 aa12.63□□□□□ -0.39
SMIM28-201ENST00000573100 PPP1R9BQ96SB3 815 aa12.63□□□□□ -0.39
SMIM28-201ENST00000573100 TRIM4Q9C037 500 aa12.63□□□□□ -0.39
SMIM28-201ENST00000573100 MIS12Q9H081 205 aa12.63□□□□□ -0.39
SMIM28-201ENST00000573100 CAAP1Q9H8G2 361 aa12.63□□□□□ -0.39
SMIM28-201ENST00000573100 DNAJC28Q9NX36 388 aa12.63□□□□□ -0.39
SMIM28-201ENST00000573100 NCKIPSDQ9NZQ3 722 aa12.63□□□□□ -0.39
SMIM28-201ENST00000573100 XPO7Q9UIA9 1087 aaKnown RBP12.63□□□□□ -0.39
SMIM28-201ENST00000573100 NAALADL1Q9UQQ1 740 aa12.63□□□□□ -0.39
SMIM28-201ENST00000573100 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.62□□□□□ -0.39
SMIM28-201ENST00000573100 CDRT15L2A8MXV6 281 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 ALOX15BO15296 676 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 ATP9BO43861 1147 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 NEBLO76041 1014 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 APOEP02649 317 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 CENPBP07199 599 aaPredicted RBP12.62□□□□□ -0.39
SMIM28-201ENST00000573100 HNRNPA2B1P22626 353 aaKnown RBP12.62□□□□□ -0.39
SMIM28-201ENST00000573100 VASPP50552 380 aaPredicted RBP12.62□□□□□ -0.39
SMIM28-201ENST00000573100 OXCT1P55809 520 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 CLDN2P57739 230 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 CLN3Q13286 438 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 ZNF177Q13360 481 aaPredicted RBP12.62□□□□□ -0.39
SMIM28-201ENST00000573100 DLG2Q15700 870 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 CNGA2Q16280 664 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 CDKN3Q16667 212 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 ZNF284Q2VY69 593 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 ZC3H12AQ5D1E8 599 aaKnown RBP12.62□□□□□ -0.39
SMIM28-201ENST00000573100 COLEC12Q5KU26 742 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 FOXD4L5Q5VV16 416 aaPredicted RBP12.62□□□□□ -0.39
SMIM28-201ENST00000573100 ZCCHC8Q6NZY4 707 aaKnown RBP12.62□□□□□ -0.39
SMIM28-201ENST00000573100 FOXR1Q6PIV2 292 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 XKR5Q6UX68 686 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 RBM44Q6ZP01 1051 aaKnown RBP12.62□□□□□ -0.39
SMIM28-201ENST00000573100 Q6ZSR6 202 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 HORMAD1Q86X24 394 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 DCP2Q8IU60 420 aaKnown RBP12.62□□□□□ -0.39
SMIM28-201ENST00000573100 CCAR2Q8N163 923 aaKnown RBP12.62□□□□□ -0.39
SMIM28-201ENST00000573100 GUF1Q8N442 669 aaKnown RBP12.62□□□□□ -0.39
SMIM28-201ENST00000573100 FOXD4L4Q8WXT5 416 aaPredicted RBP12.62□□□□□ -0.39
SMIM28-201ENST00000573100 TFAP2BQ92481 460 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 ERCC4Q92889 916 aaPredicted RBP12.62□□□□□ -0.39
SMIM28-201ENST00000573100 PRR11Q96HE9 360 aaPredicted RBP12.62□□□□□ -0.39
SMIM28-201ENST00000573100 NOX5Q96PH1 765 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 CCNL2Q96S94 520 aaPredicted RBP12.62□□□□□ -0.39
SMIM28-201ENST00000573100 FZD3Q9NPG1 666 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 WDR70Q9NW82 654 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.62□□□□□ -0.39
SMIM28-201ENST00000573100 SLC25A13Q9UJS0 675 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 ENTPD2Q9Y5L3 495 aa12.62□□□□□ -0.39
SMIM28-201ENST00000573100 NOTCH2Q04721 2471 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 F5H5T6 163 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 BNIP3LO60238 219 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 RHOBTB3O94955 611 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 TNFSF15O95150 251 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 PAEPP09466 180 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 MLLT3P42568 568 aaPredicted RBP12.61□□□□□ -0.39
SMIM28-201ENST00000573100 C6orf132Q5T0Z8 1188 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 PIP5KL1Q5T9C9 394 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 TMEM270Q6UE05 265 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 ATG14Q6ZNE5 492 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 Q6ZVU0 165 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 EFL1Q7Z2Z2 1120 aaKnown RBP12.61□□□□□ -0.39
SMIM28-201ENST00000573100 ABI3BPQ7Z7G0 1075 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 TAC4Q86UU9 113 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 SLC22A18ASQ8N1D0 253 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 WDR36Q8NI36 951 aaKnown RBP12.61□□□□□ -0.39
SMIM28-201ENST00000573100 FAM174AQ8TBP5 190 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 ARRDC3Q96B67 414 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 FAM149B1Q96BN6 582 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 BTN2A3PQ96KV6 586 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 USP25Q9UHP3 1055 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 SLC12A6Q9UHW9 1150 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 COQ4Q9Y3A0 265 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 CSNK1G3Q9Y6M4 447 aa12.61□□□□□ -0.39
SMIM28-201ENST00000573100 USP9XQ93008 2570 aaPredicted RBP12.61□□□□□ -0.39
SMIM28-201ENST00000573100 SPTAN1Q13813 2472 aaKnown RBP12.61□□□□□ -0.39
SMIM28-201ENST00000573100 M0QYV0 167 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 KPNA3O00505 521 aaPredicted RBP12.6□□□□□ -0.39
SMIM28-201ENST00000573100 RIOK3O14730 519 aaKnown RBP12.6□□□□□ -0.39
SMIM28-201ENST00000573100 TERTO14746 1132 aaKnown RBP12.6□□□□□ -0.39
SMIM28-201ENST00000573100 CETN3O15182 167 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 EFSO43281 561 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 SART1O43290 800 aaKnown RBP12.6□□□□□ -0.39
SMIM28-201ENST00000573100 TCEA3O75764 348 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 PCDH8O95206 1070 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 GJB6O95452 261 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 EPB41P11171 864 aaKnown RBP12.6□□□□□ -0.39
SMIM28-201ENST00000573100 TBXAS1P24557 533 aaPredicted RBP12.6□□□□□ -0.39
SMIM28-201ENST00000573100 LRMPQ12912 555 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 STILQ15468 1287 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 EDRF1Q3B7T1 1238 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 CBWD6Q4V339 395 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 ZCWPW2Q504Y3 356 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms