RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 TBC1D3IA0A087WXS9 549 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 TBC1D3EA0A087X179 549 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 TBC1D3KA0A087X1G2 549 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 TBC1D3FA6NER0 549 aaPredicted RBP17.78■□□□□ 0.44
LITAF-211ENST00000572255 DRGXA6NNA5 263 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 TBC1D3LB9A6J9 549 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 PLK4O00444 970 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 ALOX15BO15296 676 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 GFPT2O94808 682 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 WNT1P04628 370 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 TBC1D3HP0C7X1 549 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 ZNF18P17022 549 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 KRT83P78385 493 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 FAM46CQ5VWP2 391 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 TBC1D3GQ6DHY5 549 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 TBC1D3CQ6IPX1 549 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 RBM43Q6ZSC3 357 aaKnown RBP17.78■□□□□ 0.44
LITAF-211ENST00000572255 ZNF677Q86XU0 584 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 TBC1D3Q8IZP1 549 aaPredicted RBP17.78■□□□□ 0.44
LITAF-211ENST00000572255 GPT2Q8TD30 523 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 SKA1Q96BD8 255 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 C1orf74Q96LT6 269 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 PSMB7Q99436 277 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 C2orf49Q9BVC5 232 aaPredicted RBP17.78■□□□□ 0.44
LITAF-211ENST00000572255 AASDHPPTQ9NRN7 309 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 FAM207AQ9NSI2 230 aaPredicted RBP17.78■□□□□ 0.44
LITAF-211ENST00000572255 PPM1HQ9ULR3 514 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 TPX2Q9ULW0 747 aaKnown RBP17.78■□□□□ 0.44
LITAF-211ENST00000572255 HS3ST2Q9Y278 367 aa17.78■□□□□ 0.44
LITAF-211ENST00000572255 IGLV3-10A0A075B6K4 115 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 E9PAM4 449 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 C1QTNF3-AMACRE9PGA6 284 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 WNT9AO14904 365 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 MCF2LO15068 1137 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 SLC7A4O43246 635 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 LATO43561 262 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 BNIP3LO60238 219 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 PCDHGA12O60330 932 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 DFNA5O60443 496 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 SNAP91O60641 907 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 RTN2O75298 545 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 MT-CO1P00395 513 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 TPM2P07951 284 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 SRCP12931 536 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 CD38P28907 300 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 GRK6P43250 576 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 POLR2FP61218 127 aaKnown RBP17.77■□□□□ 0.44
LITAF-211ENST00000572255 PPP2CBP62714 309 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 PPP2CAP67775 309 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 IL9RQ01113 521 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 CDR2Q01850 454 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 CNTN1Q12860 1018 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 FKBP15Q5T1M5 1219 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 ACBD5Q5T8D3 534 aaPredicted RBP17.77■□□□□ 0.44
LITAF-211ENST00000572255 ARCQ7LC44 396 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 BNIPLQ7Z465 357 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 TFAP2DQ7Z6R9 452 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 SETD3Q86TU7 594 aaPredicted RBP17.77■□□□□ 0.44
LITAF-211ENST00000572255 FAM131BQ86XD5 332 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 PIP4K2CQ8TBX8 421 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 ZCCHC14Q8WYQ9 949 aaKnown RBP17.77■□□□□ 0.44
LITAF-211ENST00000572255 SERAC1Q96JX3 654 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 CFAP57Q96MR6 1250 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 METTL5Q9NRN9 209 aaKnown RBP17.77■□□□□ 0.44
LITAF-211ENST00000572255 FANCLQ9NW38 375 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 MPP6Q9NZW5 540 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 VPS51Q9UID3 782 aa17.77■□□□□ 0.44
LITAF-211ENST00000572255 A0A1B0GTQ1 180 aa17.76■□□□□ 0.43
LITAF-211ENST00000572255 A0A1W2PR77 199 aa17.76■□□□□ 0.43
LITAF-211ENST00000572255 EPHB6O15197 1021 aa17.76■□□□□ 0.43
LITAF-211ENST00000572255 PLRG1O43660 514 aaKnown RBP17.76■□□□□ 0.43
LITAF-211ENST00000572255 ATXN1LP0C7T5 689 aaKnown RBP17.76■□□□□ 0.43
LITAF-211ENST00000572255 CHRNB2P17787 502 aa17.76■□□□□ 0.43
LITAF-211ENST00000572255 SOX5P35711 763 aa17.76■□□□□ 0.43
LITAF-211ENST00000572255 JAM2P57087 298 aa17.76■□□□□ 0.43
LITAF-211ENST00000572255 POM121L1PQ3SYA9 428 aa17.76■□□□□ 0.43
LITAF-211ENST00000572255 ARTNQ5T4W7 220 aa17.76■□□□□ 0.43
LITAF-211ENST00000572255 AGBL4Q5VU57 503 aa17.76■□□□□ 0.43
LITAF-211ENST00000572255 EMC1Q8N766 993 aa17.76■□□□□ 0.43
LITAF-211ENST00000572255 DCAF4L2Q8NA75 395 aa17.76■□□□□ 0.43
LITAF-211ENST00000572255 ATP11CQ8NB49 1132 aa17.76■□□□□ 0.43
LITAF-211ENST00000572255 HAPLN3Q96S86 360 aa17.76■□□□□ 0.43
LITAF-211ENST00000572255 KDM4CQ9H3R0 1056 aa17.76■□□□□ 0.43
LITAF-211ENST00000572255 NLRC4Q9NPP4 1024 aa17.76■□□□□ 0.43
LITAF-211ENST00000572255 TOR4AQ9NXH8 423 aa17.76■□□□□ 0.43
LITAF-211ENST00000572255 PTPRBP23467 1997 aa17.76■□□□□ 0.43
LITAF-211ENST00000572255 DSPP15924 2871 aaKnown RBP17.76■□□□□ 0.43
LITAF-211ENST00000572255 ANKRD11Q6UB99 2663 aaPredicted RBP17.75■□□□□ 0.43
LITAF-211ENST00000572255 FREM2Q5SZK8 3169 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 PKD1L2Q7Z442 2459 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 A0A0D9SEW6 157 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 K7ERQ8 282 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 SRGAP2O75044 1071 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 CYP1A1P04798 512 aaPredicted RBP17.75■□□□□ 0.43
LITAF-211ENST00000572255 MMP8P22894 467 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 RRM1P23921 792 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 ATP11AP98196 1134 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 FMO1Q01740 532 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 INAVAQ3KP66 663 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 PRAMEF14Q5SWL7 426 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms