RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 PIAS2O75928 621 aa20.41■□□□□ 0.86
CCDC40-206ENST00000572083 TRUB2O95900 331 aaKnown RBP20.41■□□□□ 0.86
CCDC40-206ENST00000572083 LSSP48449 732 aa20.41■□□□□ 0.86
CCDC40-206ENST00000572083 ERVPABLB-1P60509 514 aa20.41■□□□□ 0.86
CCDC40-206ENST00000572083 CENPCQ03188 943 aa20.41■□□□□ 0.86
CCDC40-206ENST00000572083 DLG2Q15700 870 aa20.41■□□□□ 0.86
CCDC40-206ENST00000572083 PIP5KL1Q5T9C9 394 aa20.41■□□□□ 0.86
CCDC40-206ENST00000572083 TTC9Q92623 222 aa20.41■□□□□ 0.86
CCDC40-206ENST00000572083 NT5C1BQ96P26 610 aa20.41■□□□□ 0.86
CCDC40-206ENST00000572083 NOX5Q96PH1 765 aa20.41■□□□□ 0.86
CCDC40-206ENST00000572083 TSG101Q99816 390 aa20.41■□□□□ 0.86
CCDC40-206ENST00000572083 PRMT1Q99873 361 aaKnown RBP20.41■□□□□ 0.86
CCDC40-206ENST00000572083 ARMCX3Q9UH62 379 aaPredicted RBP20.41■□□□□ 0.86
CCDC40-206ENST00000572083 U3KQA8 63 aa20.41■□□□□ 0.86
CCDC40-206ENST00000572083 KCNU1A8MYU2 1149 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 B8ZZF3 427 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 ATP9BO43861 1147 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 ALPPL2P10696 532 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 KRT10P13645 584 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 PRCPP42785 496 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 FMO5P49326 533 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 PLK1P53350 603 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 PMS1P54277 932 aaKnown RBP20.4■□□□□ 0.86
CCDC40-206ENST00000572083 CLDN2P57739 230 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 VAC14Q08AM6 782 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 ZNF542PQ5EBM4 170 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 C3orf38Q5JPI3 329 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 NAV2Q8IVL1 2488 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 SLC22A18ASQ8N1D0 253 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 ATP6V0D2Q8N8Y2 350 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 OR52K2Q8NGK3 314 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 ERCC4Q92889 916 aaPredicted RBP20.4■□□□□ 0.86
CCDC40-206ENST00000572083 ABCG4Q9H172 646 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 CLMPQ9H6B4 373 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 THSD1Q9NS62 852 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 NLGN3Q9NZ94 848 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 SATB2Q9UPW6 733 aa20.4■□□□□ 0.86
CCDC40-206ENST00000572083 SYNJ2BP-COX16A0A087WUM0 186 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 TRIM49BA6NDI0 452 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 MCF2LO15068 1137 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 ALOX15BO15296 676 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 NEBLO76041 1014 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 IGLV3-25P01717 112 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 CTSLP07711 333 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 C6P13671 934 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 GPD2P43304 727 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 IRAK1P51617 712 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 RABGAP1LQ5R372 815 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 TTC39BQ5VTQ0 682 aaPredicted RBP20.39■□□□□ 0.85
CCDC40-206ENST00000572083 ANKRD40Q6AI12 368 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 RRAGAQ7L523 313 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 IFI44Q8TCB0 444 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 MAPK15Q8TD08 544 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 ALG14Q96F25 216 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 DPH1Q9BZG8 443 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 POPDC2Q9HBU9 364 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 COX16Q9P0S2 106 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 PIEZO2Q9H5I5 2752 aa20.39■□□□□ 0.85
CCDC40-206ENST00000572083 KPNA3O00505 521 aaPredicted RBP20.38■□□□□ 0.85
CCDC40-206ENST00000572083 GP1BAP07359 652 aa20.38■□□□□ 0.85
CCDC40-206ENST00000572083 AKT2P31751 481 aa20.38■□□□□ 0.85
CCDC40-206ENST00000572083 RPL34P49207 117 aaKnown RBP20.38■□□□□ 0.85
CCDC40-206ENST00000572083 VASPP50552 380 aaPredicted RBP20.38■□□□□ 0.85
CCDC40-206ENST00000572083 FKBP3Q00688 224 aaKnown RBP20.38■□□□□ 0.85
CCDC40-206ENST00000572083 PNOCQ13519 176 aa20.38■□□□□ 0.85
CCDC40-206ENST00000572083 ZNF284Q2VY69 593 aa20.38■□□□□ 0.85
CCDC40-206ENST00000572083 DENND1BQ6P3S1 775 aa20.38■□□□□ 0.85
CCDC40-206ENST00000572083 GCNT7Q6ZNI0 430 aa20.38■□□□□ 0.85
CCDC40-206ENST00000572083 BEND5Q7L4P6 421 aa20.38■□□□□ 0.85
CCDC40-206ENST00000572083 PTAR1Q7Z6K3 402 aaPredicted RBP20.38■□□□□ 0.85
CCDC40-206ENST00000572083 HORMAD1Q86X24 394 aa20.38■□□□□ 0.85
CCDC40-206ENST00000572083 SH2D3CQ8N5H7 860 aa20.38■□□□□ 0.85
CCDC40-206ENST00000572083 SNX21Q969T3 373 aa20.38■□□□□ 0.85
CCDC40-206ENST00000572083 RPRD1AQ96P16 312 aaPredicted RBP20.38■□□□□ 0.85
CCDC40-206ENST00000572083 FEM1AQ9BSK4 669 aa20.38■□□□□ 0.85
CCDC40-206ENST00000572083 TRIM62Q9BVG3 475 aa20.38■□□□□ 0.85
CCDC40-206ENST00000572083 FAM204AQ9H8W3 233 aa20.38■□□□□ 0.85
CCDC40-206ENST00000572083 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.38■□□□□ 0.85
CCDC40-206ENST00000572083 DNAJC28Q9NX36 388 aa20.38■□□□□ 0.85
CCDC40-206ENST00000572083 VPS28Q9UK41 221 aa20.38■□□□□ 0.85
CCDC40-206ENST00000572083 COL27A1Q8IZC6 1860 aaPredicted RBP20.38■□□□□ 0.85
CCDC40-206ENST00000572083 BOD1L1Q8NFC6 3051 aa20.38■□□□□ 0.85
CCDC40-206ENST00000572083 A0A1W2PNU3 283 aaPredicted RBP20.37■□□□□ 0.85
CCDC40-206ENST00000572083 E5RJQ4 531 aa20.37■□□□□ 0.85
CCDC40-206ENST00000572083 ZNF202O95125 648 aa20.37■□□□□ 0.85
CCDC40-206ENST00000572083 TGM2P21980 687 aa20.37■□□□□ 0.85
CCDC40-206ENST00000572083 HNRNPA2B1P22626 353 aaKnown RBP20.37■□□□□ 0.85
CCDC40-206ENST00000572083 GGCXP38435 758 aa20.37■□□□□ 0.85
CCDC40-206ENST00000572083 ACADSBP45954 432 aa20.37■□□□□ 0.85
CCDC40-206ENST00000572083 KRT85P78386 507 aa20.37■□□□□ 0.85
CCDC40-206ENST00000572083 KIAA1614Q5VZ46 1190 aa20.37■□□□□ 0.85
CCDC40-206ENST00000572083 OR6B2Q6IFH4 312 aa20.37■□□□□ 0.85
CCDC40-206ENST00000572083 FBXL22Q6P050 247 aa20.37■□□□□ 0.85
CCDC40-206ENST00000572083 ARHGEF19Q8IW93 802 aa20.37■□□□□ 0.85
CCDC40-206ENST00000572083 HSCBQ8IWL3 235 aa20.37■□□□□ 0.85
CCDC40-206ENST00000572083 ARRDC3Q96B67 414 aa20.37■□□□□ 0.85
CCDC40-206ENST00000572083 SLC12A6Q9UHW9 1150 aa20.37■□□□□ 0.85
CCDC40-206ENST00000572083 ZFR2Q9UPR6 939 aaKnown RBP20.37■□□□□ 0.85
CCDC40-206ENST00000572083 K7ESM1 405 aa20.36■□□□□ 0.85
CCDC40-206ENST00000572083 RNF103O00237 685 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms