RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 ARHGEF16Q5VV41 709 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 SCYL2Q6P3W7 929 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 TTC30AQ86WT1 665 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 PIWIL1Q96J94 861 aaKnown RBP17.13■□□□□ 0.33
LITAF-209ENST00000571688 MARK4Q96L34 752 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 RBBP8Q99708 897 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 CXorf21Q9HAI6 301 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 MRPL40Q9NQ50 206 aaKnown RBP17.13■□□□□ 0.33
LITAF-209ENST00000571688 GNPTGQ9UJJ9 305 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 COPG1Q9Y678 874 aaKnown RBP17.13■□□□□ 0.33
LITAF-209ENST00000571688 MYO18AQ92614 2054 aaKnown RBP17.12■□□□□ 0.33
LITAF-209ENST00000571688 M0QYV0 167 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 GIPC1O14908 333 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 ERVK-10P10266 1014 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 IRF9Q00978 393 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 PTPN11Q06124 597 aaPredicted RBP17.12■□□□□ 0.33
LITAF-209ENST00000571688 BCL2A1Q16548 175 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 XKR5Q6UX68 686 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 ZBTB49Q6ZSB9 765 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 ANKFN1Q8N957 763 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 TNIP2Q8NFZ5 429 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 MOCOSQ96EN8 888 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 TWNKQ96RR1 684 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 NAT9Q9BTE0 207 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 PIH1D1Q9NWS0 290 aaKnown RBP17.12■□□□□ 0.33
LITAF-209ENST00000571688 CNOT6Q9ULM6 557 aaKnown RBP17.12■□□□□ 0.33
LITAF-209ENST00000571688 FAM32AQ9Y421 112 aaKnown RBP17.12■□□□□ 0.33
LITAF-209ENST00000571688 A0A1W2PPW3 197 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 AKAP10O43572 662 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 SULT1C4O75897 302 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 TOMM70O94826 608 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 HSPA1AP0DMV8 641 aaKnown RBP17.12■□□□□ 0.33
LITAF-209ENST00000571688 HSPA1BP0DMV9 641 aaKnown RBP17.12■□□□□ 0.33
LITAF-209ENST00000571688 TFEBP19484 476 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 CD247P20963 164 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 CDH3P22223 829 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 CYP2F1P24903 491 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 CCR10P46092 362 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 SP4Q02446 784 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 TRAP1Q12931 704 aaKnown RBP17.12■□□□□ 0.33
LITAF-209ENST00000571688 MOGQ16653 247 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 CCDC14Q49A88 953 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 AARS2Q5JTZ9 985 aaKnown RBP17.12■□□□□ 0.33
LITAF-209ENST00000571688 KCNT2Q6UVM3 1135 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 ABHD15Q6UXT9 468 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 CHSY3Q70JA7 882 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 CERS2Q96G23 380 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 BCO2Q9BYV7 579 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 ARMC7Q9H6L4 198 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 NOL11Q9H8H0 719 aaKnown RBP17.12■□□□□ 0.33
LITAF-209ENST00000571688 NMRAL1Q9HBL8 299 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 VTI1BQ9UEU0 232 aa17.12■□□□□ 0.33
LITAF-209ENST00000571688 A0A096LPK6 155 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 ZNF487B1APH4 448 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 SOCS2O14508 198 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 TRIM24O15164 1050 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 PIGNO95427 931 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 MPOP05164 745 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 MYF6P23409 242 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 TTKP33981 857 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 LIMK2P53671 638 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 CDH8P55286 799 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 PRAMEP78395 509 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 TFAMQ00059 246 aaKnown RBP17.11■□□□□ 0.33
LITAF-209ENST00000571688 IRAK1BP1Q5VVH5 260 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 TTC33Q6PID6 262 aaPredicted RBP17.11■□□□□ 0.33
LITAF-209ENST00000571688 FAM183BPQ6ZVS7 135 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 ZBTB33Q86T24 672 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 ZNF786Q8N393 782 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 TERB1Q8NA31 727 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 LPGAT1Q92604 370 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 TANKQ92844 425 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 AGAP3Q96P47 875 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 TBCBQ99426 244 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 TRNAU1APQ9NX07 287 aaKnown RBP17.11■□□□□ 0.33
LITAF-209ENST00000571688 SYBUQ9NX95 663 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 ZDHHC2Q9UIJ5 367 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 MGAMO43451 1857 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 E7ENX8 843 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 MDM4O15151 490 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 JUNP05412 331 aaKnown RBP17.11■□□□□ 0.33
LITAF-209ENST00000571688 HOXC6P09630 235 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 CKMT2P17540 419 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 SPRP35270 261 aaPredicted RBP17.11■□□□□ 0.33
LITAF-209ENST00000571688 GALNT2Q10471 571 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 PRKAA1Q13131 559 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 FGD3Q5JSP0 725 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 HEATR6Q6AI08 1181 aaKnown RBP17.11■□□□□ 0.33
LITAF-209ENST00000571688 NXNQ6DKJ4 435 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 C16orf87Q6PH81 154 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 ZPBP2Q6X784 338 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 EEPD1Q7L9B9 569 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 UNC93B1Q9H1C4 597 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 JPH1Q9HDC5 661 aaPredicted RBP17.11■□□□□ 0.33
LITAF-209ENST00000571688 HMGXB4Q9UGU5 601 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 TRIM17Q9Y577 477 aa17.11■□□□□ 0.33
LITAF-209ENST00000571688 ANK1P16157 1881 aa17.1■□□□□ 0.33
LITAF-209ENST00000571688 F5H423 210 aaPredicted RBP17.1■□□□□ 0.33
LITAF-209ENST00000571688 SLCO1B7G3V0H7 640 aa17.1■□□□□ 0.33
LITAF-209ENST00000571688 MAFGO15525 162 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms