RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 FNTAP49354 379 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 DHPSP49366 369 aaPredicted RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 ZNF81P51508 661 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 CLCN4P51793 760 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 ARHGDIBP52566 201 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 ALDH18A1P54886 795 aaKnown RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 POLE2P56282 527 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 SOX10P56693 466 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 HERVK_113P62684 666 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 UBE2IP63279 158 aaKnown RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 NKX3-2P78367 333 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 SP2Q02086 613 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 SP4Q02446 784 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 PPATQ06203 517 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 DNAJC3Q13217 504 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 CHIT1Q13231 466 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 PPIL2Q13356 520 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 PLD1Q13393 1074 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 STIM1Q13586 685 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 BTG3Q14201 252 aaPredicted RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 MTF1Q14872 753 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 NCF4Q15080 339 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 TPD52L1Q16890 204 aaPredicted RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 TYSND1Q2T9J0 566 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 DUSP28Q4G0W2 176 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 MIIPQ5JXC2 388 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 GLRA4Q5JXX5 417 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 TMEM63BQ5T3F8 832 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 STXBP5Q5T5C0 1151 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 C1orf185Q5T7R7 199 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 FAXCQ5TGI0 409 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 ANXA8L1Q5VT79 327 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 KLHDC7AQ5VTJ3 777 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 ARHGEF16Q5VV41 709 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 PLA2G4FQ68DD2 849 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 THOC7Q6I9Y2 204 aaKnown RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 TANGO2Q6ICL3 276 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 RINT1Q6NUQ1 792 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 MTFR2Q6P444 385 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 UNC5AQ6ZN44 842 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 LRRC55Q6ZSA7 311 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 BEND4Q6ZU67 534 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 NCCRP1Q6ZVX7 275 aaPredicted RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 MICALCLQ6ZW33 695 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 C1orf186Q6ZWK4 172 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 MAEAQ7L5Y9 396 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 MIER3Q7Z3K6 550 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 GLRX5Q86SX6 157 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 TADA2BQ86TJ2 420 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 ERO1BQ86YB8 467 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 TMEM139Q8IV31 216 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 PSTKQ8IV42 348 aaKnown RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 CYP4X1Q8N118 509 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 BBS5Q8N3I7 341 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 Q8N3U1 123 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 CCDC155Q8N6L0 562 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 SYT2Q8N9I0 419 aaPredicted RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 ZNF565Q8N9K5 539 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 TC2NQ8N9U0 490 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 CCDC150Q8NCX0 1101 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 SHCBP1Q8NEM2 672 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 CHST13Q8NET6 341 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 LPCAT1Q8NF37 534 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 ZNF397Q8NF99 534 aaPredicted RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 FIBINQ8TAL6 211 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 ZNF507Q8TCN5 953 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 WHAMMQ8TF30 809 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 HASPINQ8TF76 798 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 SCFD1Q8WVM8 642 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 TCP11Q8WWU5 503 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 MUL1Q969V5 352 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 RAB7BQ96AH8 199 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 FAM149B1Q96BN6 582 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 TRIM43Q96BQ3 446 aaPredicted RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 PPP1R14BQ96C90 147 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 SPACA9Q96E40 222 aaPredicted RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 APIPQ96GX9 242 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 ADAD1Q96M93 576 aaKnown RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 FAM20AQ96MK3 541 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 PRICKLE1Q96MT3 831 aaPredicted RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 FAM111AQ96PZ2 611 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 SMC6Q96SB8 1091 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 DMRTA2Q96SC8 542 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 MNTQ99583 582 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 HSD17B14Q9BPX1 270 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 CORO1BQ9BR76 489 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 CCDC77Q9BR77 488 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 LXNQ9BS40 222 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 MOV10L1Q9BXT6 1211 aaKnown RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 RAB34Q9BZG1 259 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 PHACTR1Q9C0D0 580 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 ASCC2Q9H1I8 757 aaPredicted RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 PORCNQ9H237 461 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 KCNH6Q9H252 994 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 ADNPQ9H2P0 1102 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 NDST4Q9H3R1 872 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 CUEDC2Q9H467 287 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 PRDM13Q9H4Q3 707 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 CCDC86Q9H6F5 360 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms