RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	ISG20	Q96AZ6	181 aa	Known RBP	18.42	■□□□□ 0.54
PKD1-238	ENST00000570150	MKRN2	Q9H000	416 aa	Known RBP	18.42	■□□□□ 0.54
PKD1-238	ENST00000570150	SGK2	Q9HBY8	427 aa		18.42	■□□□□ 0.54
PKD1-238	ENST00000570150	VPS45	Q9NRW7	570 aa		18.42	■□□□□ 0.54
PKD1-238	ENST00000570150	RCOR3	Q9P2K3	495 aa	Predicted RBP	18.42	■□□□□ 0.54
PKD1-238	ENST00000570150	FZD4	Q9ULV1	537 aa		18.42	■□□□□ 0.54
PKD1-238	ENST00000570150	NENF	Q9UMX5	172 aa		18.42	■□□□□ 0.54
PKD1-238	ENST00000570150	FANCM	Q8IYD8	2048 aa		18.42	■□□□□ 0.54
PKD1-238	ENST00000570150	EEF2K	O00418	725 aa	Known RBP	18.41	■□□□□ 0.54
PKD1-238	ENST00000570150	LRCH4	O75427	683 aa		18.41	■□□□□ 0.54
PKD1-238	ENST00000570150	C5AR1	P21730	350 aa		18.41	■□□□□ 0.54
PKD1-238	ENST00000570150	GGCX	P38435	758 aa		18.41	■□□□□ 0.54
PKD1-238	ENST00000570150	COPA	P53621	1224 aa		18.41	■□□□□ 0.54
PKD1-238	ENST00000570150	OGDH	Q02218	1023 aa		18.41	■□□□□ 0.54
PKD1-238	ENST00000570150	SEMA3B	Q13214	749 aa		18.41	■□□□□ 0.54
PKD1-238	ENST00000570150	CSRP2	Q16527	193 aa		18.41	■□□□□ 0.54
PKD1-238	ENST00000570150	CYP2U1	Q7Z449	544 aa		18.41	■□□□□ 0.54
PKD1-238	ENST00000570150	UMODL1-AS1	Q8N2C9	162 aa		18.41	■□□□□ 0.54
PKD1-238	ENST00000570150	PCDH20	Q8N6Y1	951 aa	Known RBP	18.41	■□□□□ 0.54
PKD1-238	ENST00000570150	SPON2	Q9BUD6	331 aa		18.41	■□□□□ 0.54
PKD1-238	ENST00000570150	DHX35	Q9H5Z1	703 aa	Known RBP	18.41	■□□□□ 0.54
PKD1-238	ENST00000570150	VPS51	Q9UID3	782 aa		18.41	■□□□□ 0.54
PKD1-238	ENST00000570150	CBX4	O00257	560 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	MCF2L	O15068	1137 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	SLC7A4	O43246	635 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	PRNP	P04156	253 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	HLA-E	P13747	358 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	GNS	P15586	552 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	SERPINB6	P35237	376 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	TPMT	P51580	245 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	DLG2	Q15700	870 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	DPYSL2	Q16555	572 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	C9orf64	Q5T6V5	341 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	LYSMD4	Q5XG99	296 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	MYO19	Q96H55	970 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	PPP1R16A	Q96I34	528 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	LRIG1	Q96JA1	1093 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	RPL10L	Q96L21	214 aa	Known RBP	18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	ACE2	Q9BYF1	805 aa	Predicted RBP	18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	BTBD1	Q9H0C5	482 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	HAUS2	Q9NVX0	235 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	POLR3B	Q9NW08	1133 aa	Predicted RBP	18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	ZNF212	Q9UDV6	495 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	PCSK1N	Q9UHG2	260 aa		18.4	■□□□□ 0.54
PKD1-238	ENST00000570150	IGHV1OR15-9	A0A0B4J2B8	117 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	ARHGAP42	A6NI28	874 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	SIN3B	O75182	1162 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	PROSC	O94903	275 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	NUDT1	P36639	197 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	SLC1A1	P43005	524 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	SERPINH1	P50454	418 aa	Known RBP	18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	RPS14	P62263	151 aa	Known RBP	18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	RAD51	Q06609	339 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	SRSF5	Q13243	272 aa	Known RBP	18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	TCEAL1	Q15170	157 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	INO80D	Q53TQ3	878 aa	Predicted RBP	18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	RFX8	Q6ZV50	586 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	POLN	Q7Z5Q5	900 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	LRRC49	Q8IUZ0	686 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	SYT12	Q8IV01	421 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	TC2N	Q8N9U0	490 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	C12orf50	Q8NA57	414 aa	Predicted RBP	18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	GANC	Q8TET4	914 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	RFFL	Q8WZ73	363 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	ARHGEF2	Q92974	986 aa	Known RBP	18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	OMD	Q99983	421 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	SNRNP25	Q9BV90	132 aa	Known RBP	18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	PABPC3	Q9H361	631 aa	Known RBP	18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	KDM4C	Q9H3R0	1056 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	DYRK4	Q9NR20	520 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	TMPRSS4	Q9NRS4	437 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	SLCO3A1	Q9UIG8	710 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	CYP8B1	Q9UNU6	501 aa		18.39	■□□□□ 0.53
PKD1-238	ENST00000570150	BCLAF3	A2AJT9	711 aa	Known RBP	18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	LRRC72	A6NJI9	287 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	TTC34	A8MYJ7	566 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	KDELR3	O43731	214 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	MTA2	O94776	668 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	ZNF806	P0C7X5	589 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	MPL	P40238	635 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	CTSO	P43234	321 aa	Predicted RBP	18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	DHPS	P49366	369 aa	Predicted RBP	18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	IRAK1	P51617	712 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	CREB5	Q02930	508 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	ZNF252P-AS1	Q0IIN9	211 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	GRM3	Q14832	879 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	PDK2	Q15119	407 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	CST6	Q15828	149 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	ODF2	Q5BJF6	829 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	PPP6R3	Q5H9R7	873 aa	Predicted RBP	18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	ZSCAN30	Q86W11	494 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	ZNF354C	Q86Y25	554 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	TMIE	Q8NEW7	156 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	FRS2	Q8WU20	508 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	PTPRN2	Q92932	1015 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	ZNF419	Q96HQ0	510 aa	Predicted RBP	18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	WSB2	Q9NYS7	404 aa	Predicted RBP	18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	DNAI1	Q9UI46	699 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	SNX10	Q9Y5X0	201 aa		18.38	■□□□□ 0.53
PKD1-238	ENST00000570150	EP300	Q09472	2414 aa	Predicted RBP	18.37	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms