RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 ODF2Q5BJF6 829 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 ZNF776Q68DI1 518 aaPredicted RBP13.11□□□□□ -0.31
CDT1-203ENST00000569140 TXNRD3NBQ6F5E7 133 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 RETSATQ6NUM9 610 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 RAD9BQ6WBX8 426 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 Q6ZVU0 165 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 CYP4V2Q6ZWL3 525 aaPredicted RBP13.11□□□□□ -0.31
CDT1-203ENST00000569140 FAM124AQ86V42 546 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 ACRBPQ8NEB7 543 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 ARHGEF2Q92974 986 aaKnown RBP13.11□□□□□ -0.31
CDT1-203ENST00000569140 MYO19Q96H55 970 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 MAGEH1Q9H213 219 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 EPC1Q9H2F5 836 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 RETREG1Q9H6L5 497 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 DONSONQ9NYP3 566 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 ZNF212Q9UDV6 495 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 GMEB2Q9UKD1 530 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 RASA4BC9J798 803 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 K7ERQ8 282 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 DFFAO00273 331 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 RASA4O43374 803 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 BUB1O43683 1085 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 SPOPO43791 374 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 NDUFS2O75306 463 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 ZNF217O75362 1048 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 LCA5LO95447 670 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 SRCP12931 536 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 ERCC2P18074 760 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 BCKDHBP21953 392 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 MAN1A1P33908 653 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 ARHGAP25P42331 645 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 RECQLP46063 649 aaPredicted RBP13.1□□□□□ -0.31
CDT1-203ENST00000569140 COPAP53621 1224 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 DLG2Q15700 870 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 ARTNQ5T4W7 220 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 ARMCX6Q7L4S7 300 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 ASCL5Q7RTU5 278 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 ALYREFQ86V81 257 aaKnown RBP13.1□□□□□ -0.31
CDT1-203ENST00000569140 KBTBD6Q86V97 674 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 MMAAQ8IVH4 418 aaKnown RBP13.1□□□□□ -0.31
CDT1-203ENST00000569140 STK40Q8N2I9 435 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 RYBPQ8N488 228 aaPredicted RBP13.1□□□□□ -0.31
CDT1-203ENST00000569140 SH2D3CQ8N5H7 860 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 DEFB119Q8N690 84 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 FRMD1Q8N878 549 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 KDM1BQ8NB78 822 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 NETO2Q8NC67 525 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 KCTD6Q8NC69 237 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 TEKT4Q8WW24 435 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 HMCESQ96FZ2 354 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 CCDC114Q96M63 670 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 DESI2Q9BSY9 194 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 CALN1Q9BXU9 219 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 TNKS2Q9H2K2 1166 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 FBRSQ9HAH7 460 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 PCDH18Q9HCL0 1135 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 CD93Q9NPY3 652 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 CWC15Q9P013 229 aaKnown RBP13.1□□□□□ -0.31
CDT1-203ENST00000569140 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
CDT1-203ENST00000569140 HYOU1Q9Y4L1 999 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 ACTL7AQ9Y615 435 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 DOCK4Q8N1I0 1966 aa13.1□□□□□ -0.31
CDT1-203ENST00000569140 MYO18AQ92614 2054 aaKnown RBP13.09□□□□□ -0.31
CDT1-203ENST00000569140 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 TARSL2A2RTX5 802 aaKnown RBP13.09□□□□□ -0.31
CDT1-203ENST00000569140 PRR23AA6NEV1 266 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 RHOBTB1O94844 696 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 MT-CO1P00395 513 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 IL1BP01584 269 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 KRT7P08729 469 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 FECHP22830 423 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 AMPD1P23109 780 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 P2RY2P41231 377 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 DHPSP49366 369 aaPredicted RBP13.09□□□□□ -0.31
CDT1-203ENST00000569140 MRE11P49959 708 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 ZNF135P52742 658 aaPredicted RBP13.09□□□□□ -0.31
CDT1-203ENST00000569140 TAS2R40P59535 323 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 ARF5P84085 180 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 RPL6Q02878 288 aaKnown RBP13.09□□□□□ -0.31
CDT1-203ENST00000569140 DPYSL2Q16555 572 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 POM121L1PQ3SYA9 428 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 PARP15Q460N3 678 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 TTC31Q49AM3 519 aaPredicted RBP13.09□□□□□ -0.31
CDT1-203ENST00000569140 ATP13A4Q4VNC1 1196 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 C9orf64Q5T6V5 341 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 C22orf39Q6P5X5 142 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 TMCO3Q6UWJ1 677 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 LPCAT2Q7L5N7 544 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 C11orf74Q86VG3 221 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 TMEFF1Q8IYR6 380 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 OR8D1Q8WZ84 308 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 ANP32BQ92688 251 aaKnown RBP13.09□□□□□ -0.31
CDT1-203ENST00000569140 SP110Q9HB58 689 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 CD248Q9HCU0 757 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 HS3ST2Q9Y278 367 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 FCF1Q9Y324 198 aaKnown RBP13.09□□□□□ -0.31
CDT1-203ENST00000569140 EML5Q05BV3 1969 aa13.09□□□□□ -0.31
CDT1-203ENST00000569140 CKAP5Q14008 2032 aa13.08□□□□□ -0.31
CDT1-203ENST00000569140 FANCMQ8IYD8 2048 aa13.08□□□□□ -0.31
CDT1-203ENST00000569140 NYNRINQ9P2P1 1898 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms