RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	DRC7	Q8IY82	874 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	TBC1D3	Q8IZP1	549 aa	Predicted RBP	10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	ZCCHC9	Q8N567	271 aa	Known RBP	10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	SH2D3C	Q8N5H7	860 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	DCAF4L2	Q8NA75	395 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	OR14C36	Q8NHC7	312 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	PTPRN2	Q92932	1015 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	TBC1D31	Q96DN5	1066 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	MYO19	Q96H55	970 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	PPP1R16A	Q96I34	528 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	MCEE	Q96PE7	176 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	PCDHB18P	Q96TA0	734 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	EPAS1	Q99814	870 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	NCAPG	Q9BPX3	1015 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	OSBPL2	Q9H1P3	480 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	MTG2	Q9H4K7	406 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	CATSPERB	Q9H7T0	1116 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	CBX8	Q9HC52	389 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	CAPN10	Q9HC96	672 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	ATP13A1	Q9HD20	1204 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	MRPL47	Q9HD33	250 aa	Known RBP	10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	LAMA1	P25391	3075 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	IGLV3-10	A0A075B6K4	115 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	MED19	A0JLT2	244 aa	Predicted RBP	10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	CDX4	O14627	284 aa	Predicted RBP	10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	MCF2L	O15068	1137 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	KCNK5	O95279	499 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	PRNP	P04156	253 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	PLEK	P08567	350 aa	Predicted RBP	10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	TPM1	P09493	284 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	GZMA	P12544	262 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	RHOQ	P17081	205 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	CSRP1	P21291	193 aa	Known RBP	10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	CD27	P26842	260 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	MAPKAPK2	P49137	400 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	DNA2	P51530	1060 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	ZNF143	P52747	638 aa	Predicted RBP	10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	C21orf59	P57076	290 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	FANCC	Q00597	558 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	NRG1	Q02297	640 aa	Predicted RBP	10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	GNA12	Q03113	381 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	NR1I3	Q14994	352 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	SUZ12	Q15022	739 aa	Known RBP	10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	IQCB1	Q15051	598 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	POLD3	Q15054	466 aa	Predicted RBP	10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	TSR1	Q2NL82	804 aa	Known RBP	10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	FIGN	Q5HY92	759 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	SH3PXD2A	Q5TCZ1	1133 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	OTUD1	Q5VV17	481 aa	Predicted RBP	10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	KIAA0895L	Q68EN5	471 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	PSAPL1	Q6NUJ1	521 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	MON1B	Q7L1V2	547 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	IRF2BP2	Q7Z5L9	587 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	PRPF39	Q86UA1	669 aa	Known RBP	10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	LUZP1	Q86V48	1076 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	MCOLN2	Q8IZK6	566 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	OR2T34	Q8NGX1	318 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	JOSD2	Q8TAC2	188 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	NTAN1	Q96AB6	310 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	BIRC7	Q96CA5	298 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	CNPY3	Q9BT09	278 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	ACE2	Q9BYF1	805 aa	Predicted RBP	10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	NEUROG2	Q9H2A3	272 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	KDM4C	Q9H3R0	1056 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	HAUS4	Q9H6D7	363 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	C6orf106	Q9H6K1	298 aa	Predicted RBP	10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	AIPL1	Q9NZN9	384 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	ADAMTS1	Q9UHI8	967 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	HS3ST2	Q9Y278	367 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	SNX10	Q9Y5X0	201 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	SCIN	Q9Y6U3	715 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	ASCC3	Q8N3C0	2202 aa	Known RBP	10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	DCHS1	Q96JQ0	3298 aa		10.62	□□□□□ -0.71
UBR1-207	ENST00000568782	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	KPNA3	O00505	521 aa	Predicted RBP	10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	TM4SF5	O14894	197 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	SLC7A4	O43246	635 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	DAPK3	O43293	454 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	CBFA2T2	O43439	604 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	CREB3	O43889	395 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	DFNA5	O60443	496 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	MAGEC1	O60732	1142 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	RTN2	O75298	545 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	FTL	P02792	175 aa	Predicted RBP	10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	ADRB1	P08588	477 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	MYBL1	P10243	752 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	C7	P10643	843 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	PSMA2	P25787	234 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	EPHB2	P29323	1055 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	NUDT1	P36639	197 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	IRAK1	P51617	712 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	GALC	P54803	685 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	RAD51	Q06609	339 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	PTP4A2	Q12974	167 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	ZSCAN23	Q3MJ62	389 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	TRNP1	Q6NT89	227 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	NCEH1	Q6PIU2	408 aa		10.61	□□□□□ -0.71

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