RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 ENTPD7Q9NQZ7 604 aa7.79□□□□□ -1.16
ATXN3-250ENST00000568290 ARHGEF4Q9NR80 690 aa7.79□□□□□ -1.16
ATXN3-250ENST00000568290 CHST12Q9NRB3 414 aa7.79□□□□□ -1.16
ATXN3-250ENST00000568290 SNX15Q9NRS6 342 aa7.79□□□□□ -1.16
ATXN3-250ENST00000568290 FAM49BQ9NUQ9 324 aa7.79□□□□□ -1.16
ATXN3-250ENST00000568290 UTP6Q9NYH9 597 aaKnown RBP7.79□□□□□ -1.16
ATXN3-250ENST00000568290 SEPT10Q9P0V9 454 aa7.79□□□□□ -1.16
ATXN3-250ENST00000568290 KANSL3Q9P2N6 904 aa7.79□□□□□ -1.16
ATXN3-250ENST00000568290 RBPJLQ9UBG7 517 aa7.79□□□□□ -1.16
ATXN3-250ENST00000568290 STK39Q9UEW8 545 aa7.79□□□□□ -1.16
ATXN3-250ENST00000568290 HMGXB4Q9UGU5 601 aa7.79□□□□□ -1.16
ATXN3-250ENST00000568290 SLC7A8Q9UHI5 535 aa7.79□□□□□ -1.16
ATXN3-250ENST00000568290 CNOT11Q9UKZ1 510 aaKnown RBP7.79□□□□□ -1.16
ATXN3-250ENST00000568290 PSMD13Q9UNM6 376 aa7.79□□□□□ -1.16
ATXN3-250ENST00000568290 PLA2G4CQ9UP65 541 aa7.79□□□□□ -1.16
ATXN3-250ENST00000568290 ACOT9Q9Y305 439 aa7.79□□□□□ -1.16
ATXN3-250ENST00000568290 A0A096LPK6 155 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 CCDC195A0A1B0GUA6 201 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 DPPA5A6NC42 116 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 CXorf49A8MYA2 514 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-250ENST00000568290 PRR5-ARHGAP8B1AHC4 643 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 CASQ2O14958 399 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-250ENST00000568290 PFDN6O15212 129 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 CREB3O43889 395 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 CNMDO75829 334 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 TNFAIP8O95379 198 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 EGFRP00533 1210 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 PENKP01210 267 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-250ENST00000568290 C1QAP02745 245 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 VTNP04004 478 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 PGK2P07205 417 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 SLC2A3P11169 496 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 FGF3P11487 239 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-250ENST00000568290 GOT1P17174 413 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 PTPN1P18031 435 aaKnown RBP7.78□□□□□ -1.16
ATXN3-250ENST00000568290 AMPD1P23109 780 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 CCNCP24863 283 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 MGAT1P26572 445 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 ADRA1BP35368 520 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 PPARGP37231 505 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-250ENST00000568290 RGS2P41220 211 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 IDH3AP50213 366 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 CRYBB1P53674 252 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-250ENST00000568290 MTTPP55157 894 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 ARHGAP8P85298 464 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 POU4F1Q01851 419 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 GBE1Q04446 702 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 GAD2Q05329 585 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 BTKQ06187 659 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 GALNT1Q10472 559 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-250ENST00000568290 TBL3Q12788 808 aaKnown RBP7.78□□□□□ -1.16
ATXN3-250ENST00000568290 CUL3Q13618 768 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 PDE1CQ14123 709 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-250ENST00000568290 PCLAFQ15004 111 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 FAM83EQ2M2I3 478 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 MAP7D1Q3KQU3 841 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 MMEL1Q495T6 779 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 XKR4Q5GH76 650 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 AGAP9Q5VTM2 703 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 IRAK1BP1Q5VVH5 260 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 TAF2Q6P1X5 1199 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 PRMT9Q6P2P2 845 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 PGM2L1Q6PCE3 622 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 EPGNQ6UW88 154 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 ALKAL1Q6UXT8 129 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 ZYG11AQ6WRX3 759 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 BNC2Q6ZN30 1099 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-250ENST00000568290 CPSF7Q8N684 471 aaKnown RBP7.78□□□□□ -1.16
ATXN3-250ENST00000568290 TDRD5Q8NAT2 981 aaKnown RBP7.78□□□□□ -1.16
ATXN3-250ENST00000568290 CEP70Q8NHQ1 597 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 GATA6Q92908 595 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 POP5Q969H6 163 aaKnown RBP7.78□□□□□ -1.16
ATXN3-250ENST00000568290 ZNF669Q96BR6 464 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-250ENST00000568290 SLC10A4Q96EP9 437 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 SCYL1Q96KG9 808 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 FAM84AQ96KN4 292 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 TSGA13Q96PP4 275 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 MRPL1Q9BYD6 325 aaKnown RBP7.78□□□□□ -1.16
ATXN3-250ENST00000568290 YIPF3Q9GZM5 350 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 DRC3Q9H069 523 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 OSBPL2Q9H1P3 480 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 PRDM12Q9H4Q4 367 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 WDCPQ9H6R7 721 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 C10orf88Q9H8K7 445 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 C20orf96Q9NUD7 363 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-250ENST00000568290 TBC1D13Q9NVG8 400 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 GPATCH2LQ9NWQ4 482 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 ARMCX1Q9P291 453 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 TJP2Q9UDY2 1190 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 CDH22Q9UJ99 828 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 CDH9Q9ULB4 789 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 Q9Y3F1 56 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 ASB3Q9Y575 518 aa7.78□□□□□ -1.16
ATXN3-250ENST00000568290 SMIM28A0A1B0GU29 152 aa7.77□□□□□ -1.17
ATXN3-250ENST00000568290 AP1G1O43747 822 aa7.77□□□□□ -1.17
ATXN3-250ENST00000568290 RECQL4O94761 1208 aa7.77□□□□□ -1.17
ATXN3-250ENST00000568290 LTFP02788 710 aa7.77□□□□□ -1.17
ATXN3-250ENST00000568290 ALDOAP04075 364 aaKnown RBP7.77□□□□□ -1.17
ATXN3-250ENST00000568290 LYNP07948 512 aa7.77□□□□□ -1.17
ATXN3-250ENST00000568290 MMP3P08254 477 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms