RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 CHMP5Q9NZZ3 219 aa28.42■■■□□ 2.14
UBFD1-206ENST00000566669 WDFY3Q8IZQ1 3526 aa28.42■■■□□ 2.14
UBFD1-206ENST00000566669 RNGTTO60942 597 aaKnown RBP28.41■■■□□ 2.14
UBFD1-206ENST00000566669 RXRGP48443 463 aa28.41■■■□□ 2.14
UBFD1-206ENST00000566669 NXPH1P58417 271 aa28.41■■■□□ 2.14
UBFD1-206ENST00000566669 SLC25A52Q3SY17 297 aa28.41■■■□□ 2.14
UBFD1-206ENST00000566669 NEK5Q6P3R8 708 aa28.41■■■□□ 2.14
UBFD1-206ENST00000566669 TMPRSS12Q86WS5 348 aa28.41■■■□□ 2.14
UBFD1-206ENST00000566669 TKTL2Q9H0I9 626 aa28.41■■■□□ 2.14
UBFD1-206ENST00000566669 SIK2Q9H0K1 926 aa28.41■■■□□ 2.14
UBFD1-206ENST00000566669 CLSTN2Q9H4D0 955 aa28.41■■■□□ 2.14
UBFD1-206ENST00000566669 SETMARQ53H47 684 aaPredicted RBP28.4■■■□□ 2.14
UBFD1-206ENST00000566669 C6orf118Q5T5N4 469 aa28.4■■■□□ 2.14
UBFD1-206ENST00000566669 ARCQ7LC44 396 aa28.4■■■□□ 2.14
UBFD1-206ENST00000566669 ERICH1Q86X53 443 aa28.4■■■□□ 2.14
UBFD1-206ENST00000566669 SAP25Q8TEE9 199 aa28.4■■■□□ 2.14
UBFD1-206ENST00000566669 PIGVQ9NUD9 493 aa28.4■■■□□ 2.14
UBFD1-206ENST00000566669 LHX6Q9UPM6 363 aa28.4■■■□□ 2.14
UBFD1-206ENST00000566669 ZFYVE26Q68DK2 2539 aa28.39■■■□□ 2.14
UBFD1-206ENST00000566669 COL5A1P20908 1838 aaPredicted RBP28.39■■■□□ 2.14
UBFD1-206ENST00000566669 TAF4O00268 1085 aa28.39■■■□□ 2.14
UBFD1-206ENST00000566669 WNT1P04628 370 aa28.39■■■□□ 2.14
UBFD1-206ENST00000566669 RHOCP08134 193 aa28.39■■■□□ 2.14
UBFD1-206ENST00000566669 VAV1P15498 845 aa28.39■■■□□ 2.14
UBFD1-206ENST00000566669 CYP11B1P15538 503 aa28.39■■■□□ 2.14
UBFD1-206ENST00000566669 SULT1E1P49888 294 aa28.39■■■□□ 2.14
UBFD1-206ENST00000566669 DEUP1Q05D60 604 aa28.39■■■□□ 2.14
UBFD1-206ENST00000566669 RAPGEF1Q13905 1077 aa28.39■■■□□ 2.14
UBFD1-206ENST00000566669 DRAP1Q14919 205 aaPredicted RBP28.39■■■□□ 2.14
UBFD1-206ENST00000566669 ZNF783Q6ZMS7 281 aa28.39■■■□□ 2.14
UBFD1-206ENST00000566669 PDCD7Q8N8D1 485 aaKnown RBP28.39■■■□□ 2.14
UBFD1-206ENST00000566669 DCAF4L2Q8NA75 395 aa28.39■■■□□ 2.14
UBFD1-206ENST00000566669 PIP4K2CQ8TBX8 421 aa28.39■■■□□ 2.14
UBFD1-206ENST00000566669 GOLGA8CPA6NN73 597 aa28.38■■■□□ 2.13
UBFD1-206ENST00000566669 PRAMEF26H0Y7S4 382 aa28.38■■■□□ 2.13
UBFD1-206ENST00000566669 LDOC1O95751 146 aaPredicted RBP28.38■■■□□ 2.13
UBFD1-206ENST00000566669 STAT4Q14765 748 aa28.38■■■□□ 2.13
UBFD1-206ENST00000566669 MIIPQ5JXC2 388 aa28.38■■■□□ 2.13
UBFD1-206ENST00000566669 KLHDC7AQ5VTJ3 777 aa28.38■■■□□ 2.13
UBFD1-206ENST00000566669 ATP11CQ8NB49 1132 aa28.38■■■□□ 2.13
UBFD1-206ENST00000566669 TMIEQ8NEW7 156 aa28.38■■■□□ 2.13
UBFD1-206ENST00000566669 ARHGAP20Q9P2F6 1191 aa28.38■■■□□ 2.13
UBFD1-206ENST00000566669 DRGXA6NNA5 263 aa28.37■■■□□ 2.13
UBFD1-206ENST00000566669 ENC1O14682 589 aa28.37■■■□□ 2.13
UBFD1-206ENST00000566669 RTN2O75298 545 aa28.37■■■□□ 2.13
UBFD1-206ENST00000566669 ADCY5O95622 1261 aa28.37■■■□□ 2.13
UBFD1-206ENST00000566669 PRNPP04156 253 aa28.37■■■□□ 2.13
UBFD1-206ENST00000566669 EEF1GP26641 437 aaKnown RBP28.37■■■□□ 2.13
UBFD1-206ENST00000566669 EPHA8P29322 1005 aaPredicted RBP28.37■■■□□ 2.13
UBFD1-206ENST00000566669 HNF1BP35680 557 aa28.37■■■□□ 2.13
UBFD1-206ENST00000566669 RNASE9P60153 205 aaKnown RBP28.37■■■□□ 2.13
UBFD1-206ENST00000566669 IL9RQ01113 521 aa28.37■■■□□ 2.13
UBFD1-206ENST00000566669 CNTN1Q12860 1018 aa28.37■■■□□ 2.13
UBFD1-206ENST00000566669 FAM102AQ5T9C2 384 aaPredicted RBP28.37■■■□□ 2.13
UBFD1-206ENST00000566669 AGBL4Q5VU57 503 aa28.37■■■□□ 2.13
UBFD1-206ENST00000566669 Q6ZVU0 165 aa28.37■■■□□ 2.13
UBFD1-206ENST00000566669 HAPLN3Q96S86 360 aa28.37■■■□□ 2.13
UBFD1-206ENST00000566669 RETREG1Q9H6L5 497 aa28.37■■■□□ 2.13
UBFD1-206ENST00000566669 DYRK4Q9NR20 520 aa28.37■■■□□ 2.13
UBFD1-206ENST00000566669 AJAP1Q9UKB5 411 aaPredicted RBP28.37■■■□□ 2.13
UBFD1-206ENST00000566669 SARDHQ9UL12 918 aa28.37■■■□□ 2.13
UBFD1-206ENST00000566669 DAAM1Q9Y4D1 1078 aa28.37■■■□□ 2.13
UBFD1-206ENST00000566669 TMEM131Q92545 1883 aa28.36■■■□□ 2.13
UBFD1-206ENST00000566669 IGLV3-10A0A075B6K4 115 aa28.36■■■□□ 2.13
UBFD1-206ENST00000566669 CXorf51AA0A1B0GTR3 108 aa28.36■■■□□ 2.13
UBFD1-206ENST00000566669 PES1O00541 588 aaKnown RBP28.36■■■□□ 2.13
UBFD1-206ENST00000566669 PPP2CBP62714 309 aa28.36■■■□□ 2.13
UBFD1-206ENST00000566669 PPP2CAP67775 309 aa28.36■■■□□ 2.13
UBFD1-206ENST00000566669 SLC20A2Q08357 652 aa28.36■■■□□ 2.13
UBFD1-206ENST00000566669 ILKQ13418 452 aa28.36■■■□□ 2.13
UBFD1-206ENST00000566669 OTUD1Q5VV17 481 aaPredicted RBP28.36■■■□□ 2.13
UBFD1-206ENST00000566669 C14orf80Q86SX3 495 aa28.36■■■□□ 2.13
UBFD1-206ENST00000566669 ZNF677Q86XU0 584 aa28.36■■■□□ 2.13
UBFD1-206ENST00000566669 OR52K2Q8NGK3 314 aa28.36■■■□□ 2.13
UBFD1-206ENST00000566669 PPP1R16AQ96I34 528 aa28.36■■■□□ 2.13
UBFD1-206ENST00000566669 CNDP2Q96KP4 475 aaKnown RBP28.36■■■□□ 2.13
UBFD1-206ENST00000566669 STK33Q9BYT3 514 aa28.36■■■□□ 2.13
UBFD1-206ENST00000566669 NYNRINQ9P2P1 1898 aaKnown RBP28.36■■■□□ 2.13
UBFD1-206ENST00000566669 SRCP12931 536 aa28.35■■■□□ 2.13
UBFD1-206ENST00000566669 UCHL3P15374 230 aa28.35■■■□□ 2.13
UBFD1-206ENST00000566669 RECQLP46063 649 aaPredicted RBP28.35■■■□□ 2.13
UBFD1-206ENST00000566669 DPCR1Q3MIW9 517 aa28.35■■■□□ 2.13
UBFD1-206ENST00000566669 RETSATQ6NUM9 610 aa28.35■■■□□ 2.13
UBFD1-206ENST00000566669 XYLT1Q86Y38 959 aa28.35■■■□□ 2.13
UBFD1-206ENST00000566669 GATAD2AQ86YP4 633 aa28.35■■■□□ 2.13
UBFD1-206ENST00000566669 ZNF683Q8IZ20 524 aa28.35■■■□□ 2.13
UBFD1-206ENST00000566669 FAM174AQ8TBP5 190 aa28.35■■■□□ 2.13
UBFD1-206ENST00000566669 PLCB1Q9NQ66 1216 aa28.35■■■□□ 2.13
UBFD1-206ENST00000566669 GPSM3Q9Y4H4 160 aa28.35■■■□□ 2.13
UBFD1-206ENST00000566669 PLXNA2O75051 1894 aa28.35■■■□□ 2.13
UBFD1-206ENST00000566669 ACACAQ13085 2346 aa28.34■■■□□ 2.13
UBFD1-206ENST00000566669 PTPRBP23467 1997 aa28.34■■■□□ 2.13
UBFD1-206ENST00000566669 ILVBLA1L0T0 632 aa28.34■■■□□ 2.13
UBFD1-206ENST00000566669 RFPL3O75679 317 aa28.34■■■□□ 2.13
UBFD1-206ENST00000566669 OR1E1P30953 314 aa28.34■■■□□ 2.13
UBFD1-206ENST00000566669 IRAK1P51617 712 aa28.34■■■□□ 2.13
UBFD1-206ENST00000566669 SHBQ15464 509 aa28.34■■■□□ 2.13
UBFD1-206ENST00000566669 DPY19L2P1Q6NXN4 242 aa28.34■■■□□ 2.13
UBFD1-206ENST00000566669 TBCBQ99426 244 aa28.34■■■□□ 2.13
UBFD1-206ENST00000566669 NAA15Q9BXJ9 866 aaKnown RBP28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms