RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 EYA2O00167 538 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 TAF5LO75529 589 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 HLA-DQA2P01906 255 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 GOLGA6DP0CG33 693 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 UNGP13051 313 aaPredicted RBP2.5□□□□□ -2.01
SMG1-212ENST00000566328 GABRB3P28472 473 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 OAZ1P54368 228 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 ARL16Q0P5N6 197 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 DMP1Q13316 513 aaPredicted RBP2.5□□□□□ -2.01
SMG1-212ENST00000566328 ZNF284Q2VY69 593 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 PLK5Q496M5 336 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 RETSATQ6NUM9 610 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 GDPD4Q6W3E5 623 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 ZNF771Q7L3S4 317 aaPredicted RBP2.5□□□□□ -2.01
SMG1-212ENST00000566328 TRMT1LQ7Z2T5 733 aaKnown RBP2.5□□□□□ -2.01
SMG1-212ENST00000566328 ZDHHC23Q8IYP9 409 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 CEP76Q8TAP6 659 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 WDR60Q8WVS4 1066 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 FBXO17Q96EF6 278 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 BICD1Q96G01 975 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 REXO5Q96IC2 774 aaKnown RBP2.5□□□□□ -2.01
SMG1-212ENST00000566328 FEM1CQ96JP0 617 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 COLEC11Q9BWP8 271 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 EGLN1Q9GZT9 426 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 HIPK3Q9H422 1215 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 GOLGA6AQ9NYA3 693 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 MALT1Q9UDY8 824 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 DDX20Q9UHI6 824 aaKnown RBP2.5□□□□□ -2.01
SMG1-212ENST00000566328 CNTN6Q9UQ52 1028 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 RAI2Q9Y5P3 530 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 SNED1Q8TER0 1413 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 FRMPD2Q68DX3 1309 aaPredicted RBP2.49□□□□□ -2.01
SMG1-212ENST00000566328 TBC1D3DA0A087WVF3 549 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 TBC1D3IA0A087WXS9 549 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 TBC1D3EA0A087X179 549 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 TBC1D3KA0A087X1G2 549 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 LOC105369274A0A096LPK9 316 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 LOC102723532A0A0G2JNH3 316 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 TBC1D3BA6NDS4 549 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 TMEM247A6NEH6 219 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 TBC1D3FA6NER0 549 aaPredicted RBP2.49□□□□□ -2.01
SMG1-212ENST00000566328 POM121BA6NF01 834 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 TBC1D3LB9A6J9 549 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 TMCC1O94876 653 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 GLP2RO95838 553 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 MMP3P08254 477 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 TBC1D3HP0C7X1 549 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 DGKAP23743 735 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 THPOP40225 353 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 FOXL2P58012 376 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 RPL15P61313 204 aaKnown RBP2.49□□□□□ -2.01
SMG1-212ENST00000566328 PHEXP78562 749 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 BNC1Q01954 994 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 RHAGQ02094 409 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 TROAPQ12815 778 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 HDAC1Q13547 482 aaPredicted RBP2.49□□□□□ -2.01
SMG1-212ENST00000566328 GBX1Q14549 363 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 PPP2R5AQ15172 486 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 ACCSLQ4AC99 568 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 ZNF569Q5MCW4 686 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 KLHDC7AQ5VTJ3 777 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 FAM171A1Q5VUB5 890 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 TBC1D3GQ6DHY5 549 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 TBC1D3CQ6IPX1 549 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 NEK10Q6ZWH5 1172 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 TBC1D3Q8IZP1 549 aaPredicted RBP2.49□□□□□ -2.01
SMG1-212ENST00000566328 OR4N4Q8N0Y3 316 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 STAG1Q8WVM7 1258 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 CD101Q93033 1021 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 GPATCH3Q96I76 525 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 TXNDC15Q96J42 360 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 PGLYRP2Q96PD5 576 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 TMEM120AQ9BXJ8 343 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 GAREM1Q9H706 876 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 FSCN3Q9NQT6 498 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 RGL1Q9NZL6 768 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 SLC12A4Q9UP95 1085 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 GAB2Q9UQC2 676 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 PCDHGB6Q9Y5F9 930 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 PCDHAC2Q9Y5I4 1007 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 NFS1Q9Y697 457 aa2.49□□□□□ -2.01
SMG1-212ENST00000566328 A0A0U1RQJ8 604 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 A0A1W2PPC4 97 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 FAM172BPA6NC97 362 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 KIF1CO43896 1103 aaKnown RBP2.48□□□□□ -2.01
SMG1-212ENST00000566328 NTSR2O95665 410 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 CER1O95813 267 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 KRT5P13647 590 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 HOXB9P17482 250 aaPredicted RBP2.48□□□□□ -2.01
SMG1-212ENST00000566328 PIK3CBP42338 1070 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 KRTAP10-3P60369 221 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 RBM6P78332 1123 aaKnown RBP2.48□□□□□ -2.01
SMG1-212ENST00000566328 ZNF543Q08ER8 600 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 MYBPHQ13203 477 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 GRM3Q14832 879 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 C5orf22Q49AR2 442 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 UNQ6126/PRO20091Q6UXV3 157 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 SMIM29Q86T20 159 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 TRABD2AQ86V40 505 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 TMEM200AQ86VY9 491 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms