RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 GOLGA8SH3BPF8 625 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 PCDHGA12O60330 932 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 SNAP91O60641 907 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 MT-CO1P00395 513 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 RHOCP08134 193 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 ATXN1LP0C7T5 689 aaKnown RBP18.8■□□□□ 0.6
USB1-213ENST00000566292 SRCP12931 536 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 CCT8P50990 548 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 C21orf59P57076 290 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 IL9RQ01113 521 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 KRT31Q15323 416 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 NAA35Q5VZE5 725 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 LRSAM1Q6UWE0 723 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 ZCCHC14Q8WYQ9 949 aaKnown RBP18.8■□□□□ 0.6
USB1-213ENST00000566292 MPP6Q9NZW5 540 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 NOCTQ9UK39 431 aaKnown RBP18.8■□□□□ 0.6
USB1-213ENST00000566292 PPM1HQ9ULR3 514 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 HS3ST2Q9Y278 367 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 PKD1L2Q7Z442 2459 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 COL5A1P20908 1838 aaPredicted RBP18.79■□□□□ 0.6
USB1-213ENST00000566292 CHD5Q8TDI0 1954 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 IGLV3-10A0A075B6K4 115 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 TBC1D3DA0A087WVF3 549 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 TBC1D3IA0A087WXS9 549 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 TBC1D3EA0A087X179 549 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 TBC1D3KA0A087X1G2 549 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 A0A1B0GTQ1 180 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 TBC1D3FA6NER0 549 aaPredicted RBP18.79■□□□□ 0.6
USB1-213ENST00000566292 TBC1D3LB9A6J9 549 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 MCF2LO15068 1137 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 EPHB6O15197 1021 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 LATO43561 262 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 RTN2O75298 545 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 GFPT2O94808 682 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 DKK1O94907 266 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 TBC1D3HP0C7X1 549 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 CD38P28907 300 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 POM121L1PQ3SYA9 428 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 PRAMEF14Q5SWL7 426 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 TBC1D3GQ6DHY5 549 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 TBC1D3CQ6IPX1 549 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 RBM43Q6ZSC3 357 aaKnown RBP18.79■□□□□ 0.6
USB1-213ENST00000566292 DSG4Q86SJ6 1040 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 TBC1D3Q8IZP1 549 aaPredicted RBP18.79■□□□□ 0.6
USB1-213ENST00000566292 PIP4K2CQ8TBX8 421 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 GPT2Q8TD30 523 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 C1orf74Q96LT6 269 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 CFAP57Q96MR6 1250 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 CDC6Q99741 560 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 AASDHPPTQ9NRN7 309 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 ARHGAP20Q9P2F6 1191 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 VPS51Q9UID3 782 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 PAXBP1Q9Y5B6 917 aa18.79■□□□□ 0.6
USB1-213ENST00000566292 A0A0D9SEW6 157 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 E9PAM4 449 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 K7ERQ8 282 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 ALOX15BO15296 676 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 SLC7A4O43246 635 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 PLRG1O43660 514 aaKnown RBP18.78■□□□□ 0.6
USB1-213ENST00000566292 BNIP3LO60238 219 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 CAPNS1P04632 268 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 CTSLP07711 333 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 ZNF18P17022 549 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 CHRNB2P17787 502 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 GRK6P43250 576 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 JAM2P57087 298 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 FMO1Q01740 532 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 CNTN1Q12860 1018 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 SHBQ15464 509 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 AGBL4Q5VU57 503 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 FAM46CQ5VWP2 391 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 LRRC31Q6UY01 552 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 TFAP2DQ7Z6R9 452 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 SETD3Q86TU7 594 aaPredicted RBP18.78■□□□□ 0.6
USB1-213ENST00000566292 EMC1Q8N766 993 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 MSANTD4Q8NCY6 345 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 SERAC1Q96JX3 654 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 KDM4CQ9H3R0 1056 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 METTL5Q9NRN9 209 aaKnown RBP18.78■□□□□ 0.6
USB1-213ENST00000566292 ZNF212Q9UDV6 495 aa18.78■□□□□ 0.6
USB1-213ENST00000566292 TPX2Q9ULW0 747 aaKnown RBP18.78■□□□□ 0.6
USB1-213ENST00000566292 GOLGA4Q13439 2230 aaKnown RBP18.77■□□□□ 0.6
USB1-213ENST00000566292 SRRM3A6NNA2 597 aaPredicted RBP18.77■□□□□ 0.6
USB1-213ENST00000566292 C1QTNF3-AMACRE9PGA6 284 aa18.77■□□□□ 0.6
USB1-213ENST00000566292 SMAD6O43541 496 aaKnown RBP18.77■□□□□ 0.6
USB1-213ENST00000566292 DFNA5O60443 496 aa18.77■□□□□ 0.6
USB1-213ENST00000566292 CYP1A1P04798 512 aaPredicted RBP18.77■□□□□ 0.6
USB1-213ENST00000566292 GLDCP23378 1020 aa18.77■□□□□ 0.6
USB1-213ENST00000566292 RRM1P23921 792 aa18.77■□□□□ 0.6
USB1-213ENST00000566292 POLR2FP61218 127 aaKnown RBP18.77■□□□□ 0.6
USB1-213ENST00000566292 KRT83P78385 493 aa18.77■□□□□ 0.6
USB1-213ENST00000566292 RAB6CQ53S08 254 aa18.77■□□□□ 0.6
USB1-213ENST00000566292 CCNI2Q6ZMN8 369 aaPredicted RBP18.77■□□□□ 0.6
USB1-213ENST00000566292 ARCQ7LC44 396 aa18.77■□□□□ 0.6
USB1-213ENST00000566292 FAM131BQ86XD5 332 aa18.77■□□□□ 0.6
USB1-213ENST00000566292 ZNF677Q86XU0 584 aa18.77■□□□□ 0.6
USB1-213ENST00000566292 ATP11CQ8NB49 1132 aa18.77■□□□□ 0.6
USB1-213ENST00000566292 OR7D4Q8NG98 312 aa18.77■□□□□ 0.6
USB1-213ENST00000566292 HAPLN3Q96S86 360 aa18.77■□□□□ 0.6
USB1-213ENST00000566292 ELF4Q99607 663 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms