RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 MIPP30301 263 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 NTSP30990 170 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 HK2P52789 917 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 RALGDSQ12967 914 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 PAGE2BQ5JRK9 111 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 ADGRA1Q86SQ6 560 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 ITFG1Q8TB96 612 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 MAGEC3Q8TD91 643 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 LENG9Q96B70 501 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 FAM126AQ9BYI3 521 aaPredicted RBP13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 GLIS2Q9BZE0 524 aaPredicted RBP13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 STON1Q9Y6Q2 735 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 ADM5C9JUS6 153 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 E5RJQ4 531 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 SCAMP3O14828 347 aaKnown RBP13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 PHGDHO43175 533 aaKnown RBP13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 COPZ1P61923 177 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 CXorf40AQ8TE69 158 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 RORBQ92753 470 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 RMND5BQ96G75 393 aaPredicted RBP13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 GAD1Q99259 594 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 MTFR1LQ9H019 292 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 MARCH2Q9P0N8 246 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 C1orf232A0A0U1RR37 186 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 HACD1B0YJ81 288 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 ACSL4O60488 711 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 DGKAP23743 735 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 RPL21P46778 160 aaKnown RBP13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 CNTN2Q02246 1040 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 FAAP100Q0VG06 881 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 KLHL24Q6TFL4 600 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 SNX32Q86XE0 403 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 PPP1R16AQ96I34 528 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 EXO5Q9H790 373 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 HPSEQ9Y251 543 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 LYVE1Q9Y5Y7 322 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 SNPHO15079 494 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 TEX28O15482 410 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 TBC1D12O60347 775 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 GUCY1B2O75343 617 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 EPN2O95208 641 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 PAEPP09466 180 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 PIK3CGP48736 1102 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 POLD2P49005 469 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 PSMD7P51665 324 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 MAPK11Q15759 364 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 POM121L1PQ3SYA9 428 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 SETD9Q8NE22 299 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 BTBD9Q96Q07 612 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 RAD21L1Q9H4I0 556 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 ZNF624Q9P2J8 865 aaPredicted RBP13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 DAPK2Q9UIK4 370 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 MCM8Q9UJA3 840 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 DNPEPQ9ULA0 475 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 FAM86B1E9PN63 330 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 IL1R1P14778 569 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 RBL1P28749 1068 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 CRATP43155 626 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 SEC23AQ15436 765 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 SLC25A24Q6NUK1 477 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 RBM43Q6ZSC3 357 aaKnown RBP13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 ZNF655Q8N720 491 aaPredicted RBP13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 KIAA0895Q8NCT3 520 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 SOCS4Q8WXH5 440 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 CENPIQ92674 756 aaPredicted RBP13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 NINJ2Q9NZG7 142 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 KLQ9UEF7 1012 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 TPRKBQ9Y3C4 175 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 PXDNQ92626 1479 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 NDUFS2O75306 463 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 ANXA6P08133 673 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 IL2P60568 153 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 BRSK2Q8IWQ3 736 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 ZCCHC7Q8N3Z6 543 aaKnown RBP13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 SENP8Q96LD8 212 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 MRPL17Q9NRX2 175 aaKnown RBP13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 ABCC13Q9NSE7 274 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 COPG2Q9UBF2 871 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 VAV3Q9UKW4 847 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 MED26O95402 600 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 RARAP10276 462 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 IKBKEQ14164 716 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 SNX30Q5VWJ9 437 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 KLHL17Q6TDP4 642 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 OR6Y1Q8NGX8 325 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 ZNF671Q8TAW3 534 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 CDCA5Q96FF9 252 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 CDRT15Q96T59 188 aa13.81□□□□□ -0.2
CX3CL1-204ENST00000565912 A0A087X1B8 175 aa13.8□□□□□ -0.2
CX3CL1-204ENST00000565912 FGRP09769 529 aa13.8□□□□□ -0.2
CX3CL1-204ENST00000565912 UQCRBP14927 111 aa13.8□□□□□ -0.2
CX3CL1-204ENST00000565912 SHMT1P34896 483 aa13.8□□□□□ -0.2
CX3CL1-204ENST00000565912 ATP5C1P36542 298 aaKnown RBP13.8□□□□□ -0.2
CX3CL1-204ENST00000565912 MMP14P50281 582 aa13.8□□□□□ -0.2
CX3CL1-204ENST00000565912 GCNT1Q02742 428 aa13.8□□□□□ -0.2
CX3CL1-204ENST00000565912 HSPA14Q0VDF9 509 aa13.8□□□□□ -0.2
CX3CL1-204ENST00000565912 ATP1A4Q13733 1029 aa13.8□□□□□ -0.2
CX3CL1-204ENST00000565912 ZPBP2Q6X784 338 aa13.8□□□□□ -0.2
CX3CL1-204ENST00000565912 SIX5Q8N196 739 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms