RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 A0A1W2PPC4 97 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 FLRT2O43155 660 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 TPM3P06753 285 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 CHRNB2P17787 502 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 CTSOP43234 321 aaPredicted RBP17.15■□□□□ 0.34
USB1-211ENST00000565662 PSMD8P48556 350 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 ATP11AP98196 1134 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 OVGP1Q12889 678 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 DLG2Q15700 870 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 EFHC2Q5JST6 749 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 NEK5Q6P3R8 708 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 PIP4P1Q86T03 277 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 ZNF683Q8IZ20 524 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 PCDH20Q8N6Y1 951 aaKnown RBP17.15■□□□□ 0.34
USB1-211ENST00000565662 ATP11CQ8NB49 1132 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 FAM131CQ96AQ9 280 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 BIRC7Q96CA5 298 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 FAM129BQ96TA1 746 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 ACE2Q9BYF1 805 aaPredicted RBP17.15■□□□□ 0.34
USB1-211ENST00000565662 HSD3B7Q9H2F3 369 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 C6orf106Q9H6K1 298 aaPredicted RBP17.15■□□□□ 0.34
USB1-211ENST00000565662 PREBQ9HCU5 417 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 OR12D3Q9UGF7 316 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 SLCO3A1Q9UIG8 710 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 DMTF1Q9Y222 760 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 PCDHB9Q9Y5E1 797 aa17.15■□□□□ 0.34
USB1-211ENST00000565662 A0A1B0GTH6 734 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 GOLGA6L19H0YKK7 550 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 RNGTTO60942 597 aaKnown RBP17.14■□□□□ 0.33
USB1-211ENST00000565662 GJB3O75712 270 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 FSBPO95073 299 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 SERPINC1P01008 464 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 GZMAP12544 262 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 RHOQP17081 205 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 ADRA1BP35368 520 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 STK19P49842 368 aaPredicted RBP17.14■□□□□ 0.33
USB1-211ENST00000565662 ZNF135P52742 658 aaPredicted RBP17.14■□□□□ 0.33
USB1-211ENST00000565662 ZNF143P52747 638 aaPredicted RBP17.14■□□□□ 0.33
USB1-211ENST00000565662 GALCP54803 685 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 ADPRHP54922 357 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 C21orf59P57076 290 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 CDO1Q16878 200 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 ZNF423Q2M1K9 1284 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 SKOR2Q2VWA4 1001 aaPredicted RBP17.14■□□□□ 0.33
USB1-211ENST00000565662 ACAD10Q6JQN1 1059 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 DCUN1D2Q6PH85 259 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 VPS36Q86VN1 386 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 PLPP6Q8IY26 295 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 STK40Q8N2I9 435 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 TMIEQ8NEW7 156 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 C1orf216Q8TAB5 229 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 SLC30A5Q8TAD4 765 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 FAM174AQ8TBP5 190 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 FAM172AQ8WUF8 416 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 CASKIN2Q8WXE0 1202 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 TBC1D31Q96DN5 1066 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 EPAS1Q99814 870 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 MAGEH1Q9H213 219 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 ATP13A1Q9HD20 1204 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 TM9SF3Q9HD45 589 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 PARVAQ9NVD7 372 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 VPS51Q9UID3 782 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 BZW2Q9Y6E2 419 aaKnown RBP17.14■□□□□ 0.33
USB1-211ENST00000565662 SCINQ9Y6U3 715 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 ASCC3Q8N3C0 2202 aaKnown RBP17.14■□□□□ 0.33
USB1-211ENST00000565662 NCOR2Q9Y618 2525 aa17.14■□□□□ 0.33
USB1-211ENST00000565662 SRGAP2O75044 1071 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 MYBL1P10243 752 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 SRCP12931 536 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 ATP1A3P13637 1013 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 TFE3P19532 575 aaPredicted RBP17.13■□□□□ 0.33
USB1-211ENST00000565662 TNFAIP3P21580 790 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 PRKCIP41743 596 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 CCT8P50990 548 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 GNA12Q03113 381 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 PTP4A2Q12974 167 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 ASIC2Q16515 512 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 CCDC14Q49A88 953 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 ALFQ53S48 1182 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 N4BP2L1Q5TBK1 243 aaPredicted RBP17.13■□□□□ 0.33
USB1-211ENST00000565662 NCEH1Q6PIU2 408 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 SLFN11Q7Z7L1 901 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 C14orf80Q86SX3 495 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 PRPF39Q86UA1 669 aaKnown RBP17.13■□□□□ 0.33
USB1-211ENST00000565662 IQCHQ86VS3 1027 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 TRIM69Q86WT6 500 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 EMC1Q8N766 993 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 OR14C36Q8NHC7 312 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 ISG20Q96AZ6 181 aaKnown RBP17.13■□□□□ 0.33
USB1-211ENST00000565662 LRIG1Q96JA1 1093 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 CDC6Q99741 560 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 CNPY3Q9BT09 278 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 NEUROG2Q9H2A3 272 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 CATSPERBQ9H7T0 1116 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 TMEM248Q9NWD8 314 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 AIPL1Q9NZN9 384 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 LAMA1P25391 3075 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 ADAMTS9Q9P2N4 1935 aa17.13■□□□□ 0.33
USB1-211ENST00000565662 VILLO15195 856 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 FGF10O15520 208 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms