RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 SHROOM3Q8TF72 1996 aa15.89■□□□□ 0.13
COMMD4-210ENST00000564587 TRAV19A0A0A6YYK7 116 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 MAGEB16A2A368 324 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 C2orf78A6NCI8 922 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 SMIM23A6NLE4 172 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 CNTN5O94779 1100 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 POU2F2P09086 479 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 HNRNPA1P09651 372 aaKnown RBP eCLIP15.88■□□□□ 0.13
COMMD4-210ENST00000564587 SPATA31D3P0C874 917 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 NFKB1P19838 968 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 CD68P34810 354 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-210ENST00000564587 NPY2RP49146 381 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 CLCN4P51793 760 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 SMAD3P84022 425 aaKnown RBP15.88■□□□□ 0.13
COMMD4-210ENST00000564587 TERF2Q15554 542 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 FAM133BQ5BKY9 247 aaKnown RBP15.88■□□□□ 0.13
COMMD4-210ENST00000564587 HP1BP3Q5SSJ5 553 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-210ENST00000564587 KCTD11Q693B1 232 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 ZNF449Q6P9G9 518 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 SPATA31D4Q6ZUB0 917 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 ZNF534Q76KX8 674 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 TFAP2DQ7Z6R9 452 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 SETD3Q86TU7 594 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-210ENST00000564587 TMC8Q8IU68 726 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 BBS5Q8N3I7 341 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 SH2D3CQ8N5H7 860 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 DEPDC1BQ8WUY9 529 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 STAMBPL1Q96FJ0 436 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 TGS1Q96RS0 853 aaKnown RBP15.88■□□□□ 0.13
COMMD4-210ENST00000564587 LRRC3Q9BY71 257 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 TRPC7Q9HCX4 862 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 NDFIP2Q9NV92 336 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 RBM22Q9NW64 420 aaKnown RBP eCLIP15.88■□□□□ 0.13
COMMD4-210ENST00000564587 BFARQ9NZS9 450 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 PSMC3IPQ9P2W1 217 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-210ENST00000564587 PCDHA11Q9Y5I1 949 aa15.88■□□□□ 0.13
COMMD4-210ENST00000564587 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-210ENST00000564587 GOLGA6L7A0A1B0GV03 622 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 A0A1B0GVM2 712 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 ILVBLA1L0T0 632 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 TCAF2A6NFQ2 919 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 PTPN2P17706 415 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 SSTR1P30872 391 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 SLCO1A2P46721 670 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 EPHA5P54756 1037 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 ZNF177Q13360 481 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-210ENST00000564587 SERINC3Q13530 473 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 UBAP2Q5T6F2 1119 aaKnown RBP15.87■□□□□ 0.13
COMMD4-210ENST00000564587 MARC1Q5VT66 337 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 CHRDL2Q6WN34 429 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 TEX26Q8N6G2 289 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 GSDMBQ8TAX9 411 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 FBF1Q8TES7 1133 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 HMCESQ96FZ2 354 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 C17orf80Q9BSJ5 609 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 CAPS2Q9BXY5 557 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 CEP41Q9BYV8 373 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 SLC25A51Q9H1U9 297 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 CASS4Q9NQ75 786 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 GKN1Q9NS71 199 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 AGO1Q9UL18 857 aaKnown RBP15.87■□□□□ 0.13
COMMD4-210ENST00000564587 MAD1L1Q9Y6D9 718 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 IKBKGQ9Y6K9 419 aa15.87■□□□□ 0.13
COMMD4-210ENST00000564587 DENND4CQ5VZ89 1909 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 POC1B-GALNT4F8VUJ3 575 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 XYLBO75191 536 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 AVILO75366 819 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 BANF1O75531 89 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 KLKB1P03952 638 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 PGAM1P18669 254 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 SLC6A4P31645 630 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 MSH2P43246 934 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 CDH17Q12864 832 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 MPP3Q13368 585 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 ARHGAP15Q53QZ3 475 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 LGSNQ5TDP6 509 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 STEAP4Q687X5 459 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 ARHGAP36Q6ZRI8 547 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 GAREM2Q75VX8 874 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 ZNF354CQ86Y25 554 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 CCDC117Q8IWD4 279 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-210ENST00000564587 CNTD1Q8N815 330 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 HJURPQ8NCD3 748 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-210ENST00000564587 ARHGEF2Q92974 986 aaKnown RBP15.86■□□□□ 0.13
COMMD4-210ENST00000564587 XPO6Q96QU8 1125 aaKnown RBP15.86■□□□□ 0.13
COMMD4-210ENST00000564587 WDR83Q9BRX9 315 aaKnown RBP15.86■□□□□ 0.13
COMMD4-210ENST00000564587 ATXN3LQ9H3M9 355 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 VPS45Q9NRW7 570 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 EURLQ9NYK6 297 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 SAMD15Q9P1V8 674 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 ZFP37Q9Y6Q3 630 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-210ENST00000564587 OBSL1O75147 1896 aa15.86■□□□□ 0.13
COMMD4-210ENST00000564587 BRCA2P51587 3418 aa15.85■□□□□ 0.13
COMMD4-210ENST00000564587 TCRBV9S1A1TA0A576 114 aa15.85■□□□□ 0.13
COMMD4-210ENST00000564587 SRRM3A6NNA2 597 aaPredicted RBP15.85■□□□□ 0.13
COMMD4-210ENST00000564587 HIDE1A8MVS5 230 aa15.85■□□□□ 0.13
COMMD4-210ENST00000564587 PRAMEF11O60813 436 aa15.85■□□□□ 0.13
COMMD4-210ENST00000564587 IRF1P10914 325 aa15.85■□□□□ 0.13
COMMD4-210ENST00000564587 PRKCHP24723 683 aa15.85■□□□□ 0.13
COMMD4-210ENST00000564587 HPDP32754 393 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms