RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 H0Y8X5 98 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 PLRG1O43660 514 aaKnown RBP15.39■□□□□ 0.05
SPG7-210ENST00000564409 RHOCP08134 193 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 TBC1D3HP0C7X1 549 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 ZNF18P17022 549 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 ANP32AP39687 249 aaKnown RBP15.39■□□□□ 0.05
SPG7-210ENST00000564409 ARRB1P49407 418 aaPredicted RBP15.39■□□□□ 0.05
SPG7-210ENST00000564409 FKBP15Q5T1M5 1219 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 TBC1D3GQ6DHY5 549 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 TBC1D3CQ6IPX1 549 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 NAPEPLDQ6IQ20 393 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 NEK5Q6P3R8 708 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.39■□□□□ 0.05
SPG7-210ENST00000564409 CCNI2Q6ZMN8 369 aaPredicted RBP15.39■□□□□ 0.05
SPG7-210ENST00000564409 TRIM72Q6ZMU5 477 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 BNIPLQ7Z465 357 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 C14orf80Q86SX3 495 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 NOP9Q86U38 636 aaKnown RBP15.39■□□□□ 0.05
SPG7-210ENST00000564409 SLCO6A1Q86UG4 719 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 TRIM69Q86WT6 500 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 ZNF683Q8IZ20 524 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 TBC1D3Q8IZP1 549 aaPredicted RBP15.39■□□□□ 0.05
SPG7-210ENST00000564409 GALNT15Q8N3T1 639 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 MFSD2AQ8NA29 543 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 DCAF4L2Q8NA75 395 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 EPS8L1Q8TE68 723 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 SERAC1Q96JX3 654 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 SLC6A18Q96N87 628 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 TBCBQ99426 244 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 ELF4Q99607 663 aaPredicted RBP15.39■□□□□ 0.05
SPG7-210ENST00000564409 ERVMER34-1Q9H9K5 563 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 GDF3Q9NR23 364 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 LMBRD1Q9NUN5 540 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 TMEM59LQ9UK28 342 aa15.39■□□□□ 0.05
SPG7-210ENST00000564409 GOLGA4Q13439 2230 aaKnown RBP15.39■□□□□ 0.05
SPG7-210ENST00000564409 FRYQ5TBA9 3013 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 A0A1W2PR77 199 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 ILVBLA1L0T0 632 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 RNGTTO60942 597 aaKnown RBP15.38■□□□□ 0.05
SPG7-210ENST00000564409 ENDOD1O94919 500 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 CDK4P11802 303 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 VAV1P15498 845 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 IRAK1P51617 712 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 NOMO3P69849 1222 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 CDR2Q01850 454 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 SLC20A2Q08357 652 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 CDKAL1Q5VV42 579 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 TAF3Q5VWG9 929 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 TMIEQ8NEW7 156 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 ANKRD20A12PQ8NF67 263 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 OR52K2Q8NGK3 314 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 PIP4K2CQ8TBX8 421 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 EBF2Q9HAK2 575 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 PREBQ9HCU5 417 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 PPARGC1AQ9UBK2 798 aaKnown RBP15.38■□□□□ 0.05
SPG7-210ENST00000564409 DOCK9Q9BZ29 2069 aa15.38■□□□□ 0.05
SPG7-210ENST00000564409 FAM208BQ5VWN6 2430 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 CHD5Q8TDI0 1954 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 E9PAM4 449 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 TLR4O00206 839 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 CNTN5O94779 1100 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 PRNPP04156 253 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 MMEP08473 750 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 SRCP12931 536 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 TFE3P19532 575 aaPredicted RBP15.37■□□□□ 0.05
SPG7-210ENST00000564409 OR1E1P30953 314 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 SOX5P35711 763 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 FLT3P36888 993 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 ETFBP38117 255 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 ARL13BQ3SXY8 428 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 SETMARQ53H47 684 aaPredicted RBP15.37■□□□□ 0.05
SPG7-210ENST00000564409 ALFQ53S48 1182 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 KCNT1Q5JUK3 1230 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 NAA35Q5VZE5 725 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 RETSATQ6NUM9 610 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 LAYNQ6UX15 382 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 RBM43Q6ZSC3 357 aaKnown RBP15.37■□□□□ 0.05
SPG7-210ENST00000564409 Q6ZVU0 165 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 TMPRSS7Q7RTY8 843 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 PNPLA1Q8N8W4 532 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 ATP11CQ8NB49 1132 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 CPA5Q8WXQ8 436 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 GBP4Q96PP9 640 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 PSMB7Q99436 277 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 GANQ9H2C0 597 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 TAB2Q9NYJ8 693 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 FTSJ1Q9UET6 329 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 VPS51Q9UID3 782 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 NOCTQ9UK39 431 aaKnown RBP15.37■□□□□ 0.05
SPG7-210ENST00000564409 SARDHQ9UL12 918 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 BTBD3Q9Y2F9 522 aa15.37■□□□□ 0.05
SPG7-210ENST00000564409 SRRM3A6NNA2 597 aaPredicted RBP15.36■□□□□ 0.05
SPG7-210ENST00000564409 PRAMEF26H0Y7S4 382 aa15.36■□□□□ 0.05
SPG7-210ENST00000564409 GOLGA8SH3BPF8 625 aa15.36■□□□□ 0.05
SPG7-210ENST00000564409 I6L893 689 aaPredicted RBP15.36■□□□□ 0.05
SPG7-210ENST00000564409 RTN2O75298 545 aa15.36■□□□□ 0.05
SPG7-210ENST00000564409 WNT1P04628 370 aa15.36■□□□□ 0.05
SPG7-210ENST00000564409 CYP1A1P04798 512 aaPredicted RBP15.36■□□□□ 0.05
SPG7-210ENST00000564409 C1SP09871 688 aa15.36■□□□□ 0.05
SPG7-210ENST00000564409 ATXN1LP0C7T5 689 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms