RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 NPIPB4C9JG80 1138 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 STMND1H3BQB6 276 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 FFAR2O15552 330 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 PRC1O43663 620 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 LYL1P12980 280 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 PKMP14618 531 aaKnown RBP3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 TYK2P29597 1187 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 PPP3CCP48454 512 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 RRP1P56182 461 aaKnown RBP3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 CDK18Q07002 472 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 HYAL1Q12794 435 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 PKP1Q13835 747 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 SHBQ15464 509 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 ATPAF1Q5TC12 328 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 VWA5B1Q5TIE3 1220 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 MTFR2Q6P444 385 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 NR2C2APQ86WQ0 139 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 VPS52Q8N1B4 723 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 HORMAD2Q8N7B1 307 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 SLC2A12Q8TD20 617 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 ELAC2Q9BQ52 826 aaKnown RBP3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 KATNAL1Q9BW62 490 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 TM6SF1Q9BZW5 370 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 BRD8Q9H0E9 1235 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 VPS33BQ9H267 617 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 KLHL31Q9H511 634 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 NLRC4Q9NPP4 1024 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 TMEM248Q9NWD8 314 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 ZDHHC7Q9NXF8 308 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 DAPP1Q9UN19 280 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 RCE1Q9Y256 329 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 RAP2CQ9Y3L5 183 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 A0A087WV62 115 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 EFCAB8A8MWE9 144 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 MS4A18H0YCH9 400 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 ACTL6BO94805 426 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 CYP21A2P08686 494 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 UNGP13051 313 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 AVPR1AP37288 418 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 PCP4P48539 62 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 CDK7P50613 346 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 PNLIPRP1P54315 467 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 OAZ1P54368 228 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 TBX4P57082 545 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 HNF4GQ14541 408 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 IZUMO4Q1ZYL8 232 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 ZNF284Q2VY69 593 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 TBRG1Q3YBR2 411 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 GALNTL6Q49A17 601 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 C5orf22Q49AR2 442 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 FSCBQ5H9T9 825 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 NFRKBQ6P4R8 1299 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 RAB11FIP2Q7L804 512 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 SLC44A2Q8IWA5 706 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 ZNF527Q8NB42 609 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 SCAMP5Q8TAC9 235 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 BICD2Q8TD16 824 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 KCNJ9Q92806 393 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 EID2BQ96D98 161 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 C6orf106Q9H6K1 298 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 ELAC1Q9H777 363 aaKnown RBP3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 RMI1Q9H9A7 625 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 PCDHGB1Q9Y5G3 927 aa3.6□□□□□ -1.83
HMGB1P33-201ENST00000563485 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 SAC3D1A6NKF1 404 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 LDB2O43679 373 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 TMCC1O94876 653 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 PPP1R3DO95685 299 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 GLUD1P00367 558 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 PRSS2P07478 247 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 ITGA2BP08514 1039 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 FCGR2AP12318 317 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 GSTM2P28161 218 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 PDIA3P30101 505 aaKnown RBP3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 GLUD2P49448 558 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 ART1P52961 327 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 GAS1P54826 345 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 RPL36AP83881 106 aaKnown RBP3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 GALNT1Q10472 559 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 RPS6KA2Q15349 733 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 PFKFB4Q16877 469 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 GXYLT1Q4G148 440 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 ZNF628Q5EBL2 1059 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 TTC22Q5TAA0 569 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 HEPHL1Q6MZM0 1159 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 LIN54Q6MZP7 749 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 PRSS57Q6UWY2 283 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 SCN4BQ8IWT1 228 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 CEP76Q8TAP6 659 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 C2CD4CQ8TF44 421 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 ARRDC3Q96B67 414 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 SLITRK1Q96PX8 696 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 TRIM31Q9BZY9 425 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 CDT1Q9H211 546 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 ABHD16BQ9H3Z7 469 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 PRDM8Q9NQV8 689 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 PLSCR4Q9NRQ2 329 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 SLC22A11Q9NSA0 550 aa3.59□□□□□ -1.83
HMGB1P33-201ENST00000563485 HERC5Q9UII4 1024 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms