RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 A0A1W2PR48 441 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 OR6C76A6NM76 312 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 H0YC42 278 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 MCF2LO15068 1137 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 PAX4O43316 350 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 DHHO43323 396 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 VEGFDO43915 354 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 NRP2O60462 931 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 PEX11AO75192 247 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 RTN2O75298 545 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 SASH1O94885 1247 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 ADCY5O95622 1261 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 CER1O95813 267 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 MMP10P09238 476 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 CCR10P46092 362 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 CPA2P48052 419 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 MRPL12P52815 198 aaKnown RBP5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 CTXN1P60606 82 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 CCNA1P78396 465 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 FAM189BP81408 668 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 DBPQ10586 325 aaPredicted RBP5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 PTK6Q13882 451 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 BOP1Q14137 746 aaKnown RBP5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 ARHGEF7Q14155 803 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 CRYMQ14894 314 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 MEP1BQ16820 701 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 DCAF17Q5H9S7 520 aaPredicted RBP5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 CBWD5Q5RIA9 395 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 FAM214BQ7L5A3 538 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 GMCL1P1Q8NEA9 526 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 DENND6BQ8NEG7 585 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 REPS2Q8NFH8 660 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 OR52K2Q8NGK3 314 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 DUSP19Q8WTR2 217 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 RNF139Q8WU17 664 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 ANKRD49Q8WVL7 239 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 CLMNQ96JQ2 1002 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 COX4I2Q96KJ9 171 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 C1orf74Q96LT6 269 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 TCEANC2Q96MN5 208 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 TCHPQ9BT92 498 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 POLR3CQ9BUI4 534 aaPredicted RBP5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 CPEB1Q9BZB8 566 aaKnown RBP5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 NT5C3AQ9H0P0 336 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 RPAP3Q9H6T3 665 aaPredicted RBP5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 ZBTB26Q9HCK0 441 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 PTBP2Q9UKA9 531 aaKnown RBP5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 DDX19BQ9UMR2 479 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 ZBTB1Q9Y2K1 713 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 KCNK7Q9Y2U2 307 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 ADAM18Q9Y3Q7 739 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 KIF3AQ9Y496 699 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 PAXBP1Q9Y5B6 917 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 ACTL7AQ9Y615 435 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 CAPN6Q9Y6Q1 641 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 SCN11AQ9UI33 1791 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 ZNF831Q5JPB2 1677 aa5.42□□□□□ -1.54
VPS35P1-201ENST00000563400 SAC3D1A6NKF1 404 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 EFCAB8A8MWE9 144 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 MYO1CO00159 1063 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 IKBKBO14920 756 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 N4BP3O15049 544 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 STX6O43752 255 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 SLC25A17O43808 307 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 TSC22D2O75157 780 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 KIAA0754O94854 1291 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 LY86O95711 162 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 WEE2P0C1S8 567 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 TYMPP19971 482 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 FUT4P22083 530 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 IGHMBP2P38935 993 aaKnown RBP5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 ATP5OP48047 213 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 PTDSS1P48651 473 aaKnown RBP5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 ADARP55265 1226 aaKnown RBP5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 ANTXR2P58335 489 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 RPL7AP62424 266 aaKnown RBP5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 KCNJ10P78508 379 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 SF3A3Q12874 501 aaKnown RBP eCLIP5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 ITPK1Q13572 414 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 ATP1A4Q13733 1029 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 PDK1Q15118 436 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 CCDC57Q2TAC2 916 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 SLC9B1Q4ZJI4 515 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 GKAP1Q5VSY0 366 aaPredicted RBP5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 TMEM270Q6UE05 265 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 CLEC17AQ6ZS10 378 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 DSG4Q86SJ6 1040 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 KBTBD6Q86V97 674 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 CCDC105Q8IYK2 499 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 VPS52Q8N1B4 723 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 TTLL6Q8N841 843 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 PI4KAP1Q8N8J0 262 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 FBXO15Q8NCQ5 510 aaPredicted RBP5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 NEK11Q8NG66 645 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 FRAT1Q92837 279 aaPredicted RBP5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 BORCS6Q96GS4 357 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 MASTLQ96GX5 879 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 ACPTQ9BZG2 426 aa5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 ZNF552Q9H707 407 aaPredicted RBP5.41□□□□□ -1.54
VPS35P1-201ENST00000563400 SLC39A2Q9NP94 309 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms